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Protein Overview: FBpp0293582, Hda...

General Information:
Name(s) found: FBpp0293582 [FlyBase]
HdacX-PA / FBpp0084109 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=3R:complement(20680825..20681667,20681724..20681912); ID=FBpp0293582; name=HdacX-PB; parent=FBgn0051119,FBtr0305045; dbxref=REFSEQ:NP_001247296,GB_protein:AFH06613,FlyBase:FBpp0293582,FlyBase_Annotation_IDs:CG31119-PB; MD5=9d41772e1dff96cd40b646f061683b03; length=343; release=r5.56; species=Dmel; [FlyBase]
  • The gene Histone deacetylase X is referred to in FlyBase by the symbol Dmel\HdacX (CG31119, FBgn0051119). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20680781..20681965. It has the cytological map location 96B1. Based on sequence similarity, it is predicted to have molecular function</span>: histone deacetylase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: histone deacetylation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: histone deacetylase complex [ISS]
    Biological Process: histone deacetylation [ISS]
    Molecular Function: histone deacetylase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLTERVHH EEQESEEVVW VKRDDARSAG KLPIVFSRNY AVRFGGLERL HPFDAAKGKH  60
   61 IHKLLCAQLQ LDDGSFYEPT ELTKDQLRRI HTREYLKSLR WSMNVACIAE VPLMAFVPNR 120
  121 YIQRSYLRPM RFQAAGSILA GKLALDYGWA INLGGGFHHC CSYRGGGFCP YADISLLIVR 180
  181 LFEQEPFRVR RIMIVDLDAH QGNGHERDFN NVAAVYIFDM YNAFVYPRDH VAKESIRCAV 240
  241 ELRNYTEDGF YLRQLKRCLM QSLAEFRPDM VVYNAGTDVL EGDPLGNLAI SAEGVIERDR 300
  301 LVFSTFRALG IPVVMLLSGG YLKASAGVIT DSIVNLRLQG LLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..343] PSI-BLAST 71.30103 No description for 2nvrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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