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Protein Overview: Atg6-PA

General Information:
Name(s) found: Atg6-PA / FBpp0083975 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • The gene Autophagy-specific gene 6 is referred to in FlyBase by the symbol Dmel\Atg6 (CG5429, FBgn0010709). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:19874893..19876735. It has the cytological map location 95D10. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; salivary gland cell autophagic cell death. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: autophagic cell death [IEP]
    autophagy [IEA]
    salivary gland cell autophagic cell death [IEP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAEKQAVS FACQRCLQPI VLDEQLEKIS VHAMAELSLP IYGDNGNTLD PQDASSFDHF  60
   61 VPPYRLTDSI NGTGFMLVSD GRDNKKMSAA FKLKAELFDC LSSNSEIDHP LCEECADSML 120
  121 EIMDRELRIA EDEWDVYKAY LDELEQQRVA PNVEALDKEL DELKRSEQQL LSELKELKKE 180
  181 EQSLNDAIAE EEQEREELHE QEESYWREYT KHRRELMLTE DDKRSLECQI AYSKQQLDKL 240
  241 RDTNIFNITF HIWHAGHFGT INNFRLGRLP SVSVDWSEIN AAWGQTVLLL SALARKIGLT 300
  301 FERYRVVPFG NHSYVEVLGE NRELPLYGSG GFKFFWDTKF DAAMVAFLDC LTQFQKEVEK 360
  361 RDTEFLLPYK MEKGKIIDPS TGNSYSIKIQ FNSEEQWTKA LKFMLTNLKW GLAWVSSQFV 420
  421 SP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 17.39794 Heavy meromyosin subfragment
    2 View Details [311..422] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle