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Protein Overview: CG10300-PA

General Information:
Name(s) found: CG10300-PA / FBpp0083837 [FlyBase]
Description(s) found:
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  • gi|7301031|gb|AAF56167.1| CG10300 [Drosophila melanogaster] [NCBI NR]
  • gi|24649385|ref|NP_651174.2| CG10300 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10300 (CG10300, FBgn0039107). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:19537251..19539035. It has the cytological map location 95A10. Based on sequence similarity, it is predicted to have molecular function</span>: vitamin E binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG10300-PA translation from_gene[CG10300 CG10300 FBgn0039107] seq_release:3 mol_weight=35797 cds_boundaries:(3R:19,527,937..19,529,172[+]) aa_length:311 transcript_info:[CG10300-RA seq_release:3] gene_info:[gene symbol:CG10300 FBgn0039107 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VCJ2) CG10300 protein [DrosMelano7227.FASTAC.txt]
  • (AE003744) CG10300 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG10300-PA [Drosophila melanogaster]gi|24649385|ref|NP_651174.2| CG10300-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(19537280..19537581,19537816..19538188,19538258..19538518); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_pr [fly-100309-contam.fasta]
  • CG10300-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(19537280..19537581,19537816..19538188,19538258..19538518); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(19537280..19537581,19537816..19538188,19538258..19538518); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG10300 OS=Drosophila melanogaster GN=CG10300 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(19537280..19537581,19537816..19538188,19538258..19538518); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167,FlyMine:FBpp0083837,modMine:FBpp0083837; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(23711558..23711859,23712094..23712466,23712536..23712796); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167,FlyMine:FBpp0083837,modMine:FBpp0083837; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(23711558..23711859,23712094..23712466,23712536..23712796); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167,FlyMine:FBpp0083837,modMine:FBpp0083837; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG10300 OS=Drosophila melanogaster GN=CG10300 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0083837 type=protein; loc=3R:join(23711558..23711859,23712094..23712466,23712536..23712796); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167,FlyMine:FBpp0083837,modMine:FBpp0083837; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(23711558..23711859,23712094..23712466,23712536..23712796); ID=FBpp0083837; name=CG10300-PA; parent=FBgn0039107,FBtr0084445; dbxref=FlyBase:FBpp0083837,FlyBase_Annotation_IDs:CG10300-PA,GB_protein:AAF56167.1,REFSEQ:NP_651174,GB_protein:AAF56167,UniProt/TrEMBL:Q9VCJ2,FlyMine:FBpp0083837,modMine:FBpp0083837; MD5=f1fc3a12bf5f3597d9975792846e0589; length=311; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: transport [IEA]
    Molecular Function: vitamin E binding [ISS]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTLRTLDP KLAALAKSEC NEEQAQRAEI IATIKTWITK SPHLKAPTDE QLILAFLRRC  60
   61 RFSQEETKRR FDNYYSLRSV FPEVLGSRQV DEALLTQLQR GIHVIPMRPV SPEGPRVIIS 120
  121 QFRNIDPKKS NPREAFKLIF IMLELLALEC DNAAISGLIW VVDARDVTME QMMQYDPFLL 180
  181 KKAFALVDQC IPLRFVEIHM INMRKEGQTI FNFVTKFLPS KLPFKFVVHK KSEDLYQHLP 240
  241 RDVMTIEYGG TNGYQAEAVD HWRQKLLDSK DYLAKDAQYG TNEKLRVGLA SAWANGELDG 300
  301 MSGSFRKLEL D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 49.0 The Molecular Basis of Vitamin E Retention: Structure of Human Alpha-Tocopherol Transfer Protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.513630182949267 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle