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View Structure Prediction Details

Protein: CG10300-PA
Organism: Drosophila melanogaster
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10300-PA.

Description E-value Query
Range
Subject
Range
gi|111610626 - gi|111610626|gb|ABH11711.1| nuclear transcription factor Tfp1 [Locusta migratoria]
283.0 [0..1] [311..1]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTLRTLDP KLAALAKSEC NEEQAQRAEI IATIKTWITK SPHLKAPTDE QLILAFLRRC  60
   61 RFSQEETKRR FDNYYSLRSV FPEVLGSRQV DEALLTQLQR GIHVIPMRPV SPEGPRVIIS 120
  121 QFRNIDPKKS NPREAFKLIF IMLELLALEC DNAAISGLIW VVDARDVTME QMMQYDPFLL 180
  181 KKAFALVDQC IPLRFVEIHM INMRKEGQTI FNFVTKFLPS KLPFKFVVHK KSEDLYQHLP 240
  241 RDVMTIEYGG TNGYQAEAVD HWRQKLLDSK DYLAKDAQYG TNEKLRVGLA SAWANGELDG 300
  301 MSGSFRKLEL D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 1oipA
Description: The Molecular Basis of Vitamin E Retention: Structure of Human Alpha-Tocopherol Transfer Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.513630182949267 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle