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Protein Overview: Obp93a-PA

General Information:
Name(s) found: Obp93a-PA / FBpp0083433 [FlyBase]
Description(s) found:
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  • gi|24648633|ref|NP_650945.1| Odorant-binding protein 93a, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|23171848|gb|AAF55855.2| Odorant-binding protein 93a, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 93a is referred to in FlyBase by the symbol Dmel\Obp93a (CG17284, FBgn0038859). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:16954672..16955439. It has the cytological map location 93C1. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG17284-PA translation from_gene[CG17284 Obp93a FBgn0038859] seq_release:3 mol_weight=22319 cds_boundaries:(3R:16,954,692..16,955,456[-]) aa_length:196 transcript_info:[CG17284-RA seq_release:3] gene_info:[gene symbol:Obp93a FBgn0038859 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VDE1) CG17284 protein [DrosMelano7227.FASTAC.txt]
  • CG17284-PA, isoform A [Drosophila melanogaster]gi|24648633|ref|NP_650945.1| CG17284-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955284,16955341..16955439); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855. [fly-100309-contam.fasta]
  • Odorant-binding protein 93a CG17284-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG17284-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955284,16955341..16955439); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955284,16955341..16955439); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 93a, isoform A OS=Drosophila melanogaster GN=Obp93a PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(16954672..16954871,16954926..16955082,16955150..16955284,16955341..16955439); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855,FlyMine:FBpp0083433,modMine:FBpp0083433; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(21129619..21129717,21129428..21129562,21129204..21129360,21128950..21129149)); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855,FlyMine:FBpp0083433,modMine:FBpp0083433; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(21129619..21129717,21129428..21129562,21129204..21129360,21128950..21129149)); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855,FlyMine:FBpp0083433,modMine:FBpp0083433; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Odorant-binding protein 93a OS=Drosophila melanogaster GN=Obp93a PE=4 SV=2 [DROME.fasta.20160308]
  • FBpp0083433 type=protein; loc=3R:complement(join(21129619..21129717,21129428..21129562,21129204..21129360,21128950..21129149)); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855,FlyMine:FBpp0083433,modMine:FBpp0083433; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(21129619..21129717,21129428..21129562,21129204..21129360,21128950..21129149)); ID=FBpp0083433; name=Obp93a-PA; parent=FBgn0038859,FBtr0084030; dbxref=FlyBase:FBpp0083433,FlyBase_Annotation_IDs:CG17284-PA,GB_protein:AAF55855.2,REFSEQ:NP_650945,GB_protein:AAF55855,UniProt/TrEMBL:Q9VDE1,FlyMine:FBpp0083433,modMine:FBpp0083433; MD5=9f533a1a84e986a7344db42b63fbeb65; length=196; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVYNLLFVV IVFSYCAKSF NYTSCDHAKQ PKFLSSCCDV QKNDKAINSC RKSLLGNNST  60
   61 NSNGEVRNLK SDKVALHACI AECSFRTNGF LLSNGTVNTQ ALQKSYQQRY KNDPNMSQLM 120
  121 LKSLNSCTDY ARKRVQEFQW MPKKGDCDFY PATLLACVME KVYINCPTSK WKNTSDCTAM 180
  181 WKYLVACDDV ASNKKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] FFAS03 0.978 Nickel-iron hydrogenase, small subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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