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View Structure Prediction Details

Protein: Obp93a-PA
Organism: Drosophila melanogaster
Length: 196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp93a-PA.

Description E-value Query
Range
Subject
Range
gi|54638945|gb|E... - GA14440-PA [Drosophila pseudoobscura], Obp17284 [Drosophila pseudoobscura pseudoobscura]
gi|54638945, gi|... - gi|54638945|gb|EAL28347.1| Obp17284 [Drosophila pseudoobscura pseudoobscura], gi|125776212|ref|XP_00...
180.0 [0..1] [195..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVYNLLFVV IVFSYCAKSF NYTSCDHAKQ PKFLSSCCDV QKNDKAINSC RKSLLGNNST  60
   61 NSNGEVRNLK SDKVALHACI AECSFRTNGF LLSNGTVNTQ ALQKSYQQRY KNDPNMSQLM 120
  121 LKSLNSCTDY ARKRVQEFQW MPKKGDCDFY PATLLACVME KVYINCPTSK WKNTSDCTAM 180
  181 WKYLVACDDV ASNKKK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.978
Match: 1frfS
Description: Nickel-iron hydrogenase, small subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle