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Protein Overview: CG4538-PA, FBpp0...

General Information:
Name(s) found: FBpp0310667 [FlyBase]
CG4538-PA / FBpp0083264 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=3R:complement(15725318..15725530,15725596..15725817,15725947..15726096,15726154..15727532,15728563..15728620); ID=FBpp0310667; name=CG4538-PD; parent=FBgn0038745,FBtr0344262; dbxref=FlyBase:FBpp0310667,FlyBase_Annotation_IDs:CG4538-PD; MD5=b42aeda771e098473547eaa6829220de; length=673; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG4538 (CG4538, FBgn0038745). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:15724548..15729411. It has the cytological map location 92B6. Based on sequence similarity, it is predicted to have molecular function</span>: serine-type endopeptidase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: ATP-dependent proteolysis. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [ISS]
    endopeptidase Clp complex [ISS]
    Biological Process: protein folding [IEA]
    Molecular Function: ATP binding [IEA]
    serine-type endopeptidase activity [ISS]
    nucleoside-triphosphatase activity [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMVRRIILL GPKYSVWAKG SGAGQTHGSA RCVILSAGSA ENSDCGVRRF HLATRNCARN  60
   61 RLMRLEPAMA IPAYIDVTNA HSRTPEDSSE SGSGSEGGAS ASGGSGAKSP GGAAGSGASS 120
  121 TSGADPPGGG SDKFLSCPKC GSACTQVETF VSSTRFVKCA KCNYFFVVLS EVETKQRTKD 180
  181 EPKNQRKPPP PPQKIMEYLD KHVVGQDFAK KVLAVAVYNH YKRIHHNLPQ LQNQGAGASN 240
  241 GAGGGLDGIP RPDLLHITGI GHTLNSSPGN ELPPKSPTQM GMGGGMGGPG LGAGLTGASS 300
  301 SNARGGGDNR SGSEILDRQS TDVKLEKSNI IMLGPTGSGK TLIAQTIAKC LDVPFAICDC 360
  361 TTLTQAGYVG EDIESVISKL LQDANYNVER AQTGIVFLDE VDKIGAVPGI HQLRDVGGEG 420
  421 VQQGMLKMLE GTVVNVPERN SPRKLRGETV QVDTTNILFV ASGAYTGLDR LIARRLNEKY 480
  481 LGFGMPSTSG SGRRAAQSAA SPMDNDQEER DKCLTKVQAR DLVEFGMIPE FVGRFPVIVP 540
  541 FHSLNVSMLV RILTEPRNAL VPQYKALLGL DEVDLTFTED AVKSIAQLAM ERHTGARGLR 600
  601 SIMEQLLLDP MFIVPGSDIR GVHITADYVK GSATPEYSRD ADAAASGTVA TDSDTTTDND 660
  661 KNFENSEKVR LKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] MSA 1.420974 View MSA. No confident structure predictions are available.
    2 View Details [190..272] FFAS03 2.6 Crystal structure of helicobacter pylori ClpX
    3 View Details [273..673] PSI-BLAST 71.522879 Crystal structure of helicobacter pylori ClpX


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle