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Protein Overview: Ssdp-PC, Ssdp-PB...

General Information:
Name(s) found: Ssdp-PC / FBpp0083033 [FlyBase]
Ssdp-PB / FBpp0083032 [FlyBase]
Ssdp-PA / FBpp0083031 [FlyBase]
Description(s) found:
Found 47 descriptions.
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  • The gene Sequence-specific single-stranded DNA-binding protein is referred to in FlyBase by the symbol Dmel\Ssdp (CG7187, FBgn0011481). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14020582..14025317. It has the cytological map location 90F6-90F7. Based on sequence similarity, it is predicted to have molecular function</span>: single-stranded DNA binding. There is experimental evidence that it is involved in the biological process</span>: regulation of transcription. 24 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; mesothoracic tergum; wing; posterior scutellar bristle. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Sequence-specific single-stranded DNA-binding protein is referred to in FlyBase by the symbol Dmel\Ssdp (CG7187, FBgn0011481). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14020582..14025317. It has the cytological map location 90F6-90F7. Based on sequence similarity, it is predicted to have molecular function</span>: single-stranded DNA binding. There is experimental evidence that it is involved in the biological process</span>: regulation of transcription. 24 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; mesothoracic tergum; wing; posterior scutellar bristle. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Sequence-specific single-stranded DNA-binding protein is referred to in FlyBase by the symbol Dmel\Ssdp (CG7187, FBgn0011481). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14020582..14025317. It has the cytological map location 90F6-90F7. Based on sequence similarity, it is predicted to have molecular function</span>: single-stranded DNA binding. There is experimental evidence that it is involved in the biological process</span>: regulation of transcription. 24 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; mesothoracic tergum; wing; posterior scutellar bristle. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription [IGI]
    Molecular Function: transcription regulator activity [IEA]
    single-stranded DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGKSKTSAV PSDAQAREKL ALYVYEYLLH VGAQKAAQTF LSEIRWEKNI TLGEPPGFLH  60
   61 TWWCVFWDLY CAAPERRDQC DHSSEAKAFH DYGFVSSGYG VNGIGPGGPH NAGGPAPSPL 120
  121 GQMPPGGDGG PMGPGGPMGP NFFPNSTMRP SPPTHASSPQ PPPSQMMPGQ PPFMGGPRYP 180
  181 GGPRPGVRMQ GMGNEFNGPP GQPMMPNSMD PTRPGGGMGP MNPRMNPPRG PGGMGPMGYG 240
  241 GPGGMRGPAP GPGGMPPMGM GGAGGRPPQW QPNASAPLNA YSSSSPGNYG PGSNGPPGPG 300
  301 TPIMPSPQDN TQGGPVGGPG DSMYALMKPE FPMGGGPDGG GGGGGPGGMG PMGGGPNSMG 360
  361 PVLNGGGGPD GSGLDGMKNS PANGGPGTPR EDSGSGMGDY NLGGFGGPGE NDQTESAAIL 420
  421 KIKESMHEEA KRFEKDTDHP DYFMP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..445] PSI-BLAST 50.69897 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle