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Protein Overview: FBpp0307571, Arp5-PA

General Information:
Name(s) found: FBpp0307571 [FlyBase]
Arp5-PA / FBpp0082979 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=3R:join(14011542..14012036,14012095..14013546); ID=FBpp0307571; name=Arp5-PB; parent=FBgn0038576,FBtr0336468; dbxref=REFSEQ:NP_001262697,GB_protein:AGB96077,FlyBase:FBpp0307571,FlyBase_Annotation_IDs:CG7940-PB; MD5=997946c37bed4f8c2dab32a5cd131e0c; length=648; release=r5.56; species=Dmel; [FlyBase]
  • The gene Actin-related protein 5 is referred to in FlyBase by the symbol Dmel\Arp5 (CG7940, FBgn0038576). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14011241..14013597. It has the cytological map location 90F6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of cytoskeleton. Based on sequence similarity, it is predicted to be involved in the biological process</span>: cytoskeleton organization. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: Ino80 complex [IDA]
    actin filament [ISS]
    Biological Process: cytoskeleton organization [ISS]
    Molecular Function: protein binding [IEA]
    structural constituent of cytoskeleton [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRVLVID NGSYECRVGW SDSKEPDLRF RNVLTKPRKD RKKEAAASEG SASQTTVEQS  60
   61 AEIQVGNDIT NIEAVRAHLK SPFERNVITN WNHQEQIFDY IFTKMGFDGQ DKIDHPIILT 120
  121 EALANPNFCR QQMNELLFEC YGIPSVSYGI DALYSWKHHQ QKQKNISDAL IISFGYSTTH 180
  181 VIPVLDGKLQ LEHVRRLNVG GYHIITYLFR LMQMKYPVHL NAITISRMEK LVHEHCHIAV 240
  241 DYKEELVQWA QMDYYDEHIM KIQLPYNAVT ATNAMLTAEQ KQEKRRELAH RLLDIKKNRE 300
  301 QEKLREDEQQ LFVYNKLRQL YEQKKLDKFE RALQQQQIGT LEDLDSLIAT INSRIKRAQE 360
  361 RAQSGPRPSK QQERLNKMPK PPEGMSQADW LAELQGKREK ILGRKQARQQ QRSEQAKRHT 420
  421 HAAQERMRII SSLAKNEKRR KANGEEEDDG FGMNDNDWDV YKRINRYNDD SDSDADNEKL 480
  481 MQFDKILNHY DANTDGNSNV PPQSAAENYQ LHFGVENIRV PEVLFQPSMI GCSEAGLAEL 540
  541 IAFVLKLFPA AEQQRLVEHV YLTGGCAQFK GLKERLIKEL MEMRPFQSKF AIYESDEPTL 600
  601 SAWLGACVHA GEPTFGQTLT TRQDHQEHGR EFFREHTASN IFYPTPKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..419] PSI-BLAST 137.0 Actin
    2 View Details [420..508] PSI-BLAST 4.154902 Heavy meromyosin subfragment
    3 View Details [509..648] FFAS03 5.51 Actin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle