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View Structure Prediction Details

Protein: FBpp0307571, Arp5-PA
Organism: Drosophila melanogaster
Length: 648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307571, Arp5-PA.

Description E-value Query
Range
Subject
Range
gi|109489498 - gi|109489498|ref|XP_001076100.1| PREDICTED: similar to Actin, cytoplasmic 2 (Gamma-actin) [Rattus no...
494.0 [0..3] [419..313]

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Predicted Domain #1
Region A:
Residues: [1-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRVLVID NGSYECRVGW SDSKEPDLRF RNVLTKPRKD RKKEAAASEG SASQTTVEQS  60
   61 AEIQVGNDIT NIEAVRAHLK SPFERNVITN WNHQEQIFDY IFTKMGFDGQ DKIDHPIILT 120
  121 EALANPNFCR QQMNELLFEC YGIPSVSYGI DALYSWKHHQ QKQKNISDAL IISFGYSTTH 180
  181 VIPVLDGKLQ LEHVRRLNVG GYHIITYLFR LMQMKYPVHL NAITISRMEK LVHEHCHIAV 240
  241 DYKEELVQWA QMDYYDEHIM KIQLPYNAVT ATNAMLTAEQ KQEKRRELAH RLLDIKKNRE 300
  301 QEKLREDEQQ LFVYNKLRQL YEQKKLDKFE RALQQQQIGT LEDLDSLIAT INSRIKRAQE 360
  361 RAQSGPRPSK QQERLNKMPK PPEGMSQADW LAELQGKREK ILGRKQARQQ QRSEQAKRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 137.0
Match: 1hluA
Description: Actin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [420-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 THAAQERMRI ISSLAKNEKR RKANGEEEDD GFGMNDNDWD VYKRINRYND DSDSDADNEK  60
   61 LMQFDKILNH YDANTDGNSN VPPQSAAEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [509-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YQLHFGVENI RVPEVLFQPS MIGCSEAGLA ELIAFVLKLF PAAEQQRLVE HVYLTGGCAQ  60
   61 FKGLKERLIK ELMEMRPFQS KFAIYESDEP TLSAWLGACV HAGEPTFGQT LTTRQDHQEH 120
  121 GREFFREHTA SNIFYPTPKD 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.51
Match: 1eqyA
Description: Actin
Matching Structure (courtesy of the PDB):

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