YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0307033, alt-PG

General Information:
Name(s) found: FBpp0307033 [FlyBase]
alt-PG / FBpp0088433 [FlyBase]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • type=protein; loc=3R:complement(13500611..13500733,13500797..13501255,13501364..13501459,13501809..13502471,13502559..13503842); ID=FBpp0307033; name=alt-PI; parent=FBgn0038535,FBtr0335027; dbxref=FlyBase:FBpp0307033,FlyBase_Annotation_IDs:CG18212-PI,REFSEQ:NP_001262679,GB_protein:AGB96059; MD5=3eeeeceea8ee3e46624bfb425e6ce682; length=874; release=r5.56; species=Dmel; [FlyBase]
  • The gene aluminum tubes is referred to in FlyBase by the symbol Dmel\alt (CG18212, FBgn0038535). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:13499903..13508234. It has the cytological map location 90C1. Its molecular function is unknown. The biological processes in which it is involved are not known. 15 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 874 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFHILIVIG CVVSASLLSF LFINKIFRRK TFEEVVAEKR ALSANLYKAA GGAATKKPKK  60
   61 KELKREKKQR QREQQRDVNN EPEPEEAEDY SDGQSEGQGS VAGEEPGLSK QHVEFEPDAE 120
  121 VLTDQRRPSS VAEKENQPSG AGKKGKKDKR NGANNKTAGI LVNKNETVAV KPAANAEETP 180
  181 TLNNFETKIP KDVVELKKQE QKERKEDNNN KQQSQKKIAG GNVSKKEKVV AVETEAPVVT 240
  241 KQILKQQQQQ QNGSPKTQHN QANNKTKQQQ QNKKQNQKET LTGKDLAHAL DKLADHQNQT 300
  301 IGVNALMNVF SRAELNRSEI QILIDYLLNK QQDMPASHSE WSDDICQKLK RQLEEKEKLL 360
  361 AEEQEASIGI QAKLRELRQE VNTERAQMHA RNQAYIDKLQ GKEQELAALN QELSSLNDKL 420
  421 TLERQQLTTL RREKQANSQD LVQLQHLQQD LAHKEKCLAE MTAFVNAETQ QKNEVIQQQA 480
  481 QQLQALELQR EELEARQNNS IFELEQRKQL EAENADLKQE LSAVQQTQSE LQRVHAAELQ 540
  541 ELRQNLSVLE ARNVALSQQL TQAANSAVQA TAAQSEQAQV QTEALAQKQQ ELSALRSQVG 600
  601 SLTDAHAQQQ KQANALQSQL QEAQQRAEQL QAKEQHLQQE LQEQREKNND VRMKNWKLIE 660
  661 ALQNAEALTA KTKTNSAQSV GQQHKELQLQ QQKAVAANGG GSASSAKSEQ QRIRDLYQRL 720
  721 YPDAVKAQSG NALQASFDQW LEQVLATHVK QQQDKLRQKL DAEKSEKQSS SSHKSTQSSN 780
  781 SSSSNHNSTH NNISSNNSSS NSQSSSAAEQ QELHKQNLQL RECNDKLTQL VTKTTNTLMD 840
  841 LEERAREQDE HWRGIVEQKE QLILTLQQHA SNGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..342] PSI-BLAST 21.0 Heavy meromyosin subfragment
    2 View Details [343..444] PSI-BLAST 8.39794 Tropomyosin
    3 View Details [445..533] PSI-BLAST 3.522879 No description for 2iw5A was found.
    4 View Details [534..874] PSI-BLAST 6.0 No description for 2i1jA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.03431175303291 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.63444031758924 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.592792890362265 bayes_pls_golite062009
  • DNA binding
    		•  0.587429692741289 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle