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Protein Overview: FBpp0307971, CG5...

General Information:
Name(s) found: FBpp0307971 [FlyBase]
CG5292-PA / FBpp0082851 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=3R:12977696..12978178; ID=FBpp0307971; name=CG5292-PB; parent=FBgn0038491,FBtr0337042; dbxref=REFSEQ:NP_001262661,GB_protein:AGB96041,FlyBase:FBpp0307971,FlyBase_Annotation_IDs:CG5292-PB; MD5=6d02ceaa4daa181718a42706e854af2c; length=160; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5292 (CG5292, FBgn0038491). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:12977588..12978829. It has the cytological map location 89F1. Based on sequence similarity, it is predicted to have molecular function</span>: cytosine deaminase activity. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    cytosine deaminase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFMEEALV EARRARDAGE VPVGCVFVHG DKVVARGGNE VNVHRNATRH AEFICIDAIL  60
   61 ASCRERRLPA RQLFSEITVV VTVEPCIMCS AALHTLGVKE IIYGCENDRF GGKTVVDVAA 120
  121 VVGHRIEITG GVRADEAMAL LKDFYKGDNP AAPPQAKKKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 45.0 Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytidine deaminase activity
    		•  4.42667374679603 bayes_pls_golite062009
  • deaminase activity
    		•  2.76997916054448 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  2.27736397496642 bayes_pls_golite062009
  • catalytic activity
    		•  1.70756445127105 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.51294035758003 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.24697538679504 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.16679252289538 bayes_pls_golite062009
  • IMP cyclohydrolase activity
    		•  1.11605611485835 bayes_pls_golite062009
  • binding
    		•  1.05190374148481 bayes_pls_golite062009
  • phosphoribosylaminoimidazolecarboxamide formyltransferase activity
    		•  0.827438033765078 bayes_pls_golite062009
  • transferase activity
    		•  0.771056210634777 bayes_pls_golite062009
  • hydrolase activity
    		•  0.452099352697972 bayes_pls_golite062009
  • cyclohydrolase activity
    		•  0.308525511259279 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  0.1546696349714 bayes_pls_golite062009
  • protein binding
    		•  0.095488575269861 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle