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Protein Overview: mRpS11-PA

General Information:
Name(s) found: mRpS11-PA / FBpp0088833 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • The gene mitochondrial ribosomal protein S11 is referred to in FlyBase by the symbol Dmel\mRpS11 (CG5184, FBgn0038474). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:12898453..12899517. It has the cytological map location 89E11. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 200 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial small ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKSVFLSA LRSITMPAVP LQTSRIHTSA CWRKAEDRKE MLASLPAKDE GTVGEKTVDI  60
   61 DTLINRKAKF FPDASTANTL FNGIPFNELP ICNIRVSPNN TIISVTDHKG VLRLIRSCGI 120
  121 EGFKNTRKGT NIAAQATAVT ISGKAIELGW KTVRVKVRGL GPGRMSAIKG LQMGGLNIVS 180
  181 ITDNTHVSFN PPRPRKQRSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] MSA 1.080978 View MSA. No confident structure predictions are available.
    2 View Details [80..200] PSI-BLAST 44.69897 No description for 1vs5K was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.83351366956976 bayes_pls_golite062009
  • structural molecule activity
    		•  9.25292687983044 bayes_pls_golite062009
  • RNA binding
    		•  1.52264031918826 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.983215686081669 bayes_pls_golite062009
  • binding
    		•  0.558121720172199 bayes_pls_golite062009
  • rRNA binding
    		•  0.357032493028 bayes_pls_golite062009
  • catalytic activity
    		•  0.249767694451989 bayes_pls_golite062009
  • translation regulator activity
    		•  0.17520676474539 bayes_pls_golite062009
  • protein binding
    		•  0.013467373576568 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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