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Protein Overview: Fas1-PC

General Information:
Name(s) found: Fas1-PC / FBpp0082784 [FlyBase]
Description(s) found:
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  • gi|24647500|ref|NP_732164.1| fasciclin 1, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|23171488|gb|AAN13714.1| fasciclin 1, isoform C [Drosophila melanogaster] [NCBI NR]
  • The gene Fasciclin 1 is referred to in FlyBase by the symbol Dmel\Fas1 (CG6588, FBgn0000634). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:12450948..12465493. It has the cytological map location 89D5-89D6. There is experimental evidence that it has the molecular function</span>: cell adhesion molecule binding. There is experimental evidence that it is involved in the biological process</span>: axon guidance; homophilic cell adhesion; calcium-independent cell-cell adhesion; neuron recognition. 26 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • >CG6588-PC translation from_gene[CG6588 Fas1 FBgn0000634] seq_release:3 mol_weight=72992 cds_boundaries:(3R:12,451,852..12,462,928[+]) aa_length:655 transcript_info:[CG6588-RC seq_release:3] gene_info:[gene symbol:Fas1 FBgn0000634 gene_boundaries:(3R:1 [hmr_yeast5_DM3-1_pombe.fasta]
  • CG6588-PC, isoform C [Drosophila melanogaster]gi|24647500|ref|NP_732164.1| CG6588-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(12451834..12451938,12457331..12457463,12457545..12457711,12457786..12458016,12458084..12458252,12458330..12458490,12460096..12460104,12460808..12460816,12461268..12461422,12461489..12461579,12461644..12461864,12461924..12462086,1 [fly-100309-contam.fasta]
  • CG6588-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Fasciclin 1 CG6588-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(12451834..12451938,12457331..12457463,12457545..12457711,12457786..12458016,12458084..12458252,12458330..12458490,12460096..12460104,12460808..12460816,12461268..12461422,12461489..12461579,12461644..12461864,12461924..12462086,12462151..12462298,12462708..12462913); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0000634,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(12451834..12451938,12457331..12457463,12457545..12457711,12457786..12458016,12458084..12458252,12458330..12458490,12460096..12460104,12460808..12460816,12461268..12461422,12461489..12461579,12461644..12461864,12461924..12462086,12462151..12462298,12462708..12462913); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0000634,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Fasciclin 1, isoform C OS=Drosophila melanogaster GN=Fas1 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(12451834..12451938,12457331..12457463,12457545..12457711,12457786..12458016,12458084..12458252,12458330..12458490,12460096..12460104,12460808..12460816,12461268..12461422,12461489..12461579,12461644..12461864,12461924..12462086,12462151..12462298,12462708..12462913); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0262742,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714,FlyMine:FBpp0082784,modMine:FBpp0082784; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(16626112..16626216,16631609..16631741,16631823..16631989,16632064..16632294,16632362..16632530,16632608..16632768,16634374..16634382,16635086..16635094,16635546..16635700,16635767..16635857,16635922..16636142,16636202..16636364,16636429..16636576,16636986..16637191); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0262742,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714,FlyMine:FBpp0082784,modMine:FBpp0082784; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(16626112..16626216,16631609..16631741,16631823..16631989,16632064..16632294,16632362..16632530,16632608..16632768,16634374..16634382,16635086..16635094,16635546..16635700,16635767..16635857,16635922..16636142,16636202..16636364,16636429..16636576,16636986..16637191); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0262742,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714,FlyMine:FBpp0082784,modMine:FBpp0082784; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P10674, Fasciclin 1, isoform C OS=Drosophila melanogaster GN=Fas1 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0082784 type=protein; loc=3R:join(16626112..16626216,16631609..16631741,16631823..16631989,16632064..16632294,16632362..16632530,16632608..16632768,16634374..16634382,16635086..16635094,16635546..16635700,16635767..16635857,16635922..16636142,16636202..16636364,16636429..16636576,16636986..16637191); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0262742,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714,FlyMine:FBpp0082784,modMine:FBpp0082784; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(16626112..16626216,16631609..16631741,16631823..16631989,16632064..16632294,16632362..16632530,16632608..16632768,16634374..16634382,16635086..16635094,16635546..16635700,16635767..16635857,16635922..16636142,16636202..16636364,16636429..16636576,16636986..16637191); ID=FBpp0082784; name=Fas1-PC; parent=FBgn0262742,FBtr0083334; dbxref=FlyBase:FBpp0082784,FlyBase_Annotation_IDs:CG6588-PC,GB_protein:AAN13714.1,REFSEQ:NP_732164,GB_protein:AAN13714,UniProt/TrEMBL:Q8INA9,FlyMine:FBpp0082784,modMine:FBpp0082784; MD5=c65f6df9381eae5816fdba7aeddafcb1; length=655; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 655 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNAAALLLA LLCAANAAAA ADLADKLRDD SELSQFYSLL ESNQIANSTL SLRSCTIFVP  60
   61 TNEAFQRYKS KTAHVLYHIT TEAYTQKRLP NTVSSDMAGN PPLYITKNSN GDIFVNNARI 120
  121 IPSLSVETNS DGKRQIMHII DEVLEPLTVK AGHSDTPNNP NALKFLKNAE EFNVDNIGVR 180
  181 TYRSQVTMAK KESVYDAAGQ HTFLVPVDEG FKLSARSSLV DGKVIDGHVI PNTVIFTAAA 240
  241 QHDDPKASAA FEDLLKVTVS FFKQKNGKMY VKSNTIVGDA KHRVGVVLAE IVKANIPVSN 300
  301 GVVHLIHRPL MIIDTTVTQF LQSFKFMNEN AENGALRKFY EVIMDNGGAV LDDINSLTEV 360
  361 TILAPSNEAW NSSNINNVLR DRNKMRQILN MHIIKDRLNV DKIRQKNANL IAQVPTVNNN 420
  421 TFLYFNVRGE GSDTVITVEG GGVNATVIQA DVAQTNGYVH IIDHVLGVPY TTVLGKLESD 480
  481 PMMSDTYKMG KFSHFNDQLN NTQRRFTYFV PRDKGWQKTE LDYPSAHKKL FMADFSYHSK 540
  541 SILERHLAIS DKEYTMKDLV KFSQESGSVI LPTFRDSLSI RVEEEAGRYV IIWNYKKINV 600
  601 YRPDVECTNG IIHVIDYPLL EEKDVVVAGG SYLPESSICI ILANLIMITV AKFLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..313] FFAS03 6.52 Fasciclin I
    2 View Details [314..655] PSI-BLAST 63.0 Fasciclin I


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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