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View Structure Prediction Details

Protein: Fas1-PC
Organism: Drosophila melanogaster
Length: 655 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fas1-PC.

Description E-value Query
Range
Subject
Range
Fas1-PA - The gene Fasciclin 1 is referred to in FlyBase by the symbol Dmel\Fas1 (CG6588, FBgn0000634). It is ...
454.0 [0..27] [655..27]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNAAALLLA LLCAANAAAA ADLADKLRDD SELSQFYSLL ESNQIANSTL SLRSCTIFVP  60
   61 TNEAFQRYKS KTAHVLYHIT TEAYTQKRLP NTVSSDMAGN PPLYITKNSN GDIFVNNARI 120
  121 IPSLSVETNS DGKRQIMHII DEVLEPLTVK AGHSDTPNNP NALKFLKNAE EFNVDNIGVR 180
  181 TYRSQVTMAK KESVYDAAGQ HTFLVPVDEG FKLSARSSLV DGKVIDGHVI PNTVIFTAAA 240
  241 QHDDPKASAA FEDLLKVTVS FFKQKNGKMY VKSNTIVGDA KHRVGVVLAE IVKANIPVSN 300
  301 GVVHLIHRPL MII

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.52
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [314-655]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTTVTQFLQS FKFMNENAEN GALRKFYEVI MDNGGAVLDD INSLTEVTIL APSNEAWNSS  60
   61 NINNVLRDRN KMRQILNMHI IKDRLNVDKI RQKNANLIAQ VPTVNNNTFL YFNVRGEGSD 120
  121 TVITVEGGGV NATVIQADVA QTNGYVHIID HVLGVPYTTV LGKLESDPMM SDTYKMGKFS 180
  181 HFNDQLNNTQ RRFTYFVPRD KGWQKTELDY PSAHKKLFMA DFSYHSKSIL ERHLAISDKE 240
  241 YTMKDLVKFS QESGSVILPT FRDSLSIRVE EEAGRYVIIW NYKKINVYRP DVECTNGIIH 300
  301 VIDYPLLEEK DVVVAGGSYL PESSICIILA NLIMITVAKF LN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.0
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle