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Protein Overview: FBpp0310460, CG5...

General Information:
Name(s) found: FBpp0310460 [FlyBase]
CG5916-PA / FBpp0082705 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=3R:join(11973364..11973392,11973465..11974096,11974157..11974488); ID=FBpp0310460; name=CG5916-PB; parent=FBgn0038401,FBtr0344009; dbxref=FlyBase:FBpp0310460,FlyBase_Annotation_IDs:CG5916-PB; MD5=948f8ea514986cec3ead1e7ef4b3c706; length=330; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5916 (CG5916, FBgn0038401). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11972741..11975115. It has the cytological map location 89B6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: Rab GTPase activator activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: regulation of Rab GTPase activity. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATASSKFS DVDEYGFKRG DHFDYNNYSK FMDGYLKTLT RRRMKWEAIL QQNTDLTQVD  60
   61 AKLKRYIRKG IPGPYRPDVW MKISGAAAAQ RRSPDLFRNL LRTEPFDKEI SDSISIDLPR 120
  121 TFPDNIHFDM KKQRLYNILI AYAHHNRDVG YCQGLNYIAG LLLIVTDDEE KSFWLLKHIV 180
  181 ENIVPQYHSH NMANLLRDLA VFRELVIRRI PAVNRHVDNL GLPYPVIASK WFICIFAEVL 240
  241 PVETVLRIWD CVFAEGYKIV FRAALTMFVT HKNAILGCDD IAALANLFRD TMIQDNIVTD 300
  301 CHGFVEAMFS LRLKRSELES LRKVAVLNPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..330] PSI-BLAST 41.045757 No description for 2qfzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle