YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0310460, CG5...
Organism: Drosophila melanogaster
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310460, CG5....

Description E-value Query
Range
Subject
Range
gi|109506156 - gi|109506156|ref|XP_001070749.1| PREDICTED: similar to USP6 N-terminal-like protein [Rattus norvegic...
266.0 [0..2] [329..116]

Back

Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATASSKFS DVDEYGFKRG DHFDYNNYSK FMDGYLKTLT RRRMKWEAIL QQNTDLTQVD  60
   61 AKLKRYIRKG IPGPYRPDVW MKISGAAAAQ RRSPDLFRNL LRTEPFDKEI SDSISIDLPR 120
  121 TFPDNIHFDM KKQRLYNILI AYAHHNRDVG YCQGLNYIAG LLLIVTDDEE KSFWLLKHIV 180
  181 ENIVPQYHSH NMANLLRDLA VFRELVIRRI PAVNRHVDNL GLPYPVIASK WFICIFAEVL 240
  241 PVETVLRIWD CVFAEGYKIV FRAALTMFVT HKNAILGCDD IAALANLFRD TMIQDNIVTD 300
  301 CHGFVEAMFS LRLKRSELES LRKVAVLNPA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.045757
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle