YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG9593-PA

General Information:
Name(s) found: CG9593-PA / FBpp0082632 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7300057|gb|AAF55227.1| CG9593 [Drosophila melanogaster] [NCBI NR]
  • gi|24647247|ref|NP_650493.1| CG9593 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9593 (CG9593, FBgn0038365). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11627866..11629261. It has the cytological map location 89A5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: receptor binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: signal transduction. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG9593-PA translation from_gene[CG9593 CG9593 FBgn0038365] seq_release:3 mol_weight=41847 cds_boundaries:(3R:11,627,884..11,629,276[+]) aa_length:363 transcript_info:[CG9593-RA seq_release:3] gene_info:[gene symbol:CG9593 FBgn0038365 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VF34) CG9593 protein [DrosMelano7227.FASTAC.txt]
  • (AE003710) CG9593 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9593-PA [Drosophila melanogaster]gi|24647247|ref|NP_650493.1| CG9593-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(11627866..11627934,11628167..11628487,11628560..11629261); ID=FBpp0082632; name=CG9593-PA; parent=FBgn0038365,FBtr0083178; dbxref=FlyBase:FBpp0082632,FlyBase_Annotation_IDs:CG9593-PA,GB_protein:AAF55227.1,REFSEQ:NP_650493,GB_prot [fly-100309-contam.fasta]
  • CG9593-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(11627866..11627934,11628167..11628487,11628560..11629261); ID=FBpp0082632; name=CG9593-PA; parent=FBgn0038365,FBtr0083178; dbxref=FlyBase:FBpp0082632,FlyBase_Annotation_IDs:CG9593-PA,GB_protein:AAF55227.1,REFSEQ:NP_650493,GB_protein:AAF55227; MD5=d5116a4297eeabb2048581c9196f0b47; length=363; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(11627866..11627934,11628167..11628487,11628560..11629261); ID=FBpp0082632; name=CG9593-PA; parent=FBgn0038365,FBtr0083178; dbxref=FlyBase:FBpp0082632,FlyBase_Annotation_IDs:CG9593-PA,GB_protein:AAF55227.1,REFSEQ:NP_650493,GB_protein:AAF55227; MD5=d5116a4297eeabb2048581c9196f0b47; length=363; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG9593 OS=Drosophila melanogaster GN=CG9593 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEA]
    Molecular Function: receptor binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHGAPEVIC WDHHRQMVES GQHELVLIRK TLAAQALKLR GLEINLHRVL SKVVLLADAV  60
   61 VQVPGRYSSK EDPLAVLSER LNLLLERLNQ EERISTNLLE LKEWSTKVCQ EPSPSQTLPK 120
  121 ELTEEKDEPK PAKSDCHELD EGVRVDGVYR FLVPERNEVQ RDLYERYCAF ATDGPAWTVI 180
  181 QSRGGSFDPH ENFNRSWDEY RAGFGNLSRD FWFGNEFAHK ILYRDDHELR IELQEAGEPL 240
  241 DWAEYPLFWL DSESYNYQLS VAGEFRGSLP DALEQHNRMD FSTYDRRRNH AKSADSTCGE 300
  301 DYGGGWWFDR CTQCNLNGEH GVHQRASPAI IWMNWRTGTD KPKSSRMMIR PVNPTPGDNS 360
  361 DGD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 59.69897 Fibrinogen C-terminal domains; Fibrinogen gamma chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • receptor binding
    		•  1.9776581053362 bayes_pls_golite062009
  • eukaryotic cell surface binding
    		•  1.88588139563708 bayes_pls_golite062009
  • integrin binding
    		•  1.84403663032634 bayes_pls_golite062009
  • carbohydrate binding
    		•  1.60481550486624 bayes_pls_golite062009
  • cell surface binding
    		•  1.53370693640531 bayes_pls_golite062009
  • binding
    		•  0.811708735919118 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.578727264859991 bayes_pls_golite062009
  • sugar binding
    		•  0.39803193480921 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  0.27731523067605 bayes_pls_golite062009
  • protein binding
    		•  0.249736491712423 bayes_pls_golite062009
  • vascular endothelial growth factor receptor binding
    		•  0.10959185189203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle