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Protein Overview: CG14870-PA

General Information:
Name(s) found: CG14870-PA / FBpp0082599 [FlyBase]
Description(s) found:
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  • gi|7300030|gb|AAF55201.1| CG14870 [Drosophila melanogaster] [NCBI NR]
  • gi|24647174|ref|NP_650470.1| CG14870 [Drosophila melanogaster] [NCBI NR]
  • gi|189181932|gb|ACD81742.1| IP20372p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG14870 (CG14870, FBgn0038342). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11307628..11308626. It has the cytological map location 88F6. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: cilium assembly. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG14870-PA translation from_gene[CG14870 CG14870 FBgn0038342] seq_release:3 mol_weight=26866 cds_boundaries:(3R:11,307,747..11,308,587[+]) aa_length:241 transcript_info:[CG14870-RA seq_release:3] gene_info:[gene symbol:CG14870 FBgn0038342 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VF59) CG14870 protein [DrosMelano7227.FASTAC.txt]
  • (AE003709) CG14870 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG14870-PA [Drosophila melanogaster]gi|24647174|ref|NP_650470.1| CG14870-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(11307729..11308116,11308235..11308572); ID=FBpp0082599; name=CG14870-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201; MD5 [fly-100309-contam.fasta]
  • CG14870-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(11307729..11308116,11308235..11308572); ID=FBpp0082599; name=CG14870-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(11307729..11308116,11308235..11308572); ID=FBpp0082599; name=CG14870-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG14870 OS=Drosophila melanogaster GN=CG14870-RA PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(11307729..11308116,11308235..11308572); ID=FBpp0082599; name=CG14870-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201,FlyMine:FBpp0082599,modMine:FBpp0082599; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG14870 OS=Drosophila melanogaster GN=CG14870-RA PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:join(15482007..15482394,15482513..15482850); ID=FBpp0082599; name=CG14870-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201,FlyMine:FBpp0082599,modMine:FBpp0082599; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(15482007..15482394,15482513..15482850); ID=FBpp0082599; name=B9d1-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201,FlyMine:FBpp0082599,modMine:FBpp0082599; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG14870 OS=Drosophila melanogaster GN=B9d1 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0082599 type=protein; loc=3R:join(15482007..15482394,15482513..15482850); ID=FBpp0082599; name=B9d1-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201,FlyMine:FBpp0082599,modMine:FBpp0082599; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(15482007..15482394,15482513..15482850); ID=FBpp0082599; name=B9d1-PA; parent=FBgn0038342,FBtr0083145; dbxref=FlyBase:FBpp0082599,FlyBase_Annotation_IDs:CG14870-PA,GB_protein:AAF55201.1,REFSEQ:NP_650470,GB_protein:AAF55201,UniProt/TrEMBL:Q9VF59,FlyMine:FBpp0082599,modMine:FBpp0082599; MD5=feba18697fff14d10cb993c3d7881621; length=241; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cilium assembly [UNKNOWN][IEP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASEGISLP GNEETTPPHE KHKQKAKKAK KKSRSAKESV PNAMDAKATA SYFSLSIVGQ  60
   61 IVSATFPLGP DKEFVFLRYE MVAGPDWQLS SGPQHGLTQL ATNRRGHFNE PIVFNMPIEV 120
  121 TYKSTSPYGW PQILVTVFGR SGLGRETLLG YAHIHLPVFG SRRPADQTEQ LQAPILMPKC 180
  181 PNMMADITSW LLRREPELKD PKVLLDNLKC KGLSMESYGS LQFQLSSVMR GARKLGYHWH 240
  241 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] FFAS03 0.965 Telomere end binding protein alpha subunit
    2 View Details [143..241] MSA 1.047973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle