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Protein Overview: Aats-ser-PA, FBp...

General Information:
Name(s) found: FBpp0306656 [FlyBase]
Aats-ser-PA / FBpp0082542 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=3R:11166558..11167811; ID=FBpp0306656; name=Aats-ser-PB; parent=FBgn0021750,FBtr0334589; dbxref=FlyBase:FBpp0306656,FlyBase_Annotation_IDs:CG4938-PB,REFSEQ:NP_001262599,GB_protein:AGB95980; MD5=7fdd0c7344be6dd3cf3f4c38de9fff88; length=417; release=r5.56; species=Dmel; [FlyBase]
  • The gene Seryl-tRNA synthetase is referred to in FlyBase by the symbol Dmel\Aats-ser (CG4938, FBgn0021750). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11166407..11167939. It has the cytological map location 88F1. Based on sequence similarity, it is predicted to have molecular function</span>: serine-tRNA ligase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: seryl-tRNA aminoacylation. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 417 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: seryl-tRNA aminoacylation [ISS]
    Molecular Function: ATP binding [IEA]
    serine-tRNA ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPTNSQLW RPLLLLRRQR SHDAKAVEAP IHRPVPTSAQ LDELERNVVV RHHKNNVPLI  60
   61 RSLIQELDAG DQHKLRQLQA ELEQLPNATH PRLRDYGEEP RELAQYVHRQ LTPQSRLKEF 120
  121 SELARALNLY RMDHLGNYTG HKSYYLTGQL ATLEQAIIQY ALQAVTEHGF KLISVPDILP 180
  181 KEVIESCGMR TEGERTQVYK LDTGECLSGT SEMALAGFFA NKLLSEDQLP LKVTAVSRCY 240
  241 RAETSGLQEE KGIYRVHQFN KVEMFAICTE EQSEAELEEF KNIEVDLFRR LGLNFRLLDM 300
  301 PPCELGAPAY QKYDIEAWMP GRQMWGEISS CSNCTDYQAR RLGIRYRRSA DGQILHAHTI 360
  361 NGTATAIPRL LIALLESYQK EDGIEIPAVL RPFMDNQELI TRNKRIPETK LVKFIKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..417] PSI-BLAST 76.09691 Crystal Structure of mammalian mitochondrial seryl-tRNA synthetase complexed with seryl-adenylate


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle