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Protein Overview: CG4338-PA

General Information:
Name(s) found: CG4338-PA / FBpp0082525 [FlyBase]
Description(s) found:
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  • gi|7299988|gb|AAF55160.1| CG4338 [Drosophila melanogaster] [NCBI NR]
  • gi|33589476|gb|AAQ22505.1| LD46811p [Drosophila melanogaster] [NCBI NR]
  • gi|24647066|ref|NP_650441.1| CG4338 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG4338 (CG4338, FBgn0038313). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11101258..11102196. It has the cytological map location 88E11. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4338-PA translation from_gene[CG4338 CG4338 FBgn0038313] seq_release:3 mol_weight=29913 cds_boundaries:(3R:11,101,354..11,102,175[+]) aa_length:274 transcript_info:[CG4338-RA seq_release:3] gene_info:[gene symbol:CG4338 FBgn0038313 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VFA0) CG4338 protein (LD46811p) [DrosMelano7227.FASTAC.txt]
  • (AE003708) CG4338 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4338-PA [Drosophila melanogaster]gi|33589476|gb|AAQ22505.1| LD46811p [Drosophila melanogaster]gi|24647066|ref|NP_650441.1| CG4338-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:11101336..11102160; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160; MD5=07bf78593c116a7333afb2ac44 [fly-100309-contam.fasta]
  • CG4338-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD46811p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:11101336..11102160; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:11101336..11102160; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG4338 OS=Drosophila melanogaster GN=CG4338 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:11101336..11102160; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160,FlyMine:FBpp0082525,modMine:FBpp0082525; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Probable ribosome biogenesis protein CG4338/Dmel_CG4338 OS=Drosophila melanogaster GN=CG4338 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:15275614..15276438; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160,FlyMine:FBpp0082525,modMine:FBpp0082525; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:15275614..15276438; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160,FlyMine:FBpp0082525,modMine:FBpp0082525; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Probable ribosome biogenesis protein CG4338 OS=Drosophila melanogaster GN=CG4338 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0082525 type=protein; loc=3R:15275614..15276438; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160,FlyMine:FBpp0082525,modMine:FBpp0082525; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:15275614..15276438; ID=FBpp0082525; name=CG4338-PA; parent=FBgn0038313,FBtr0083066; dbxref=FlyBase:FBpp0082525,FlyBase_Annotation_IDs:CG4338-PA,GB_protein:AAF55160.1,REFSEQ:NP_650441,GB_protein:AAF55160,UniProt/TrEMBL:Q9VFA0,FlyMine:FBpp0082525,modMine:FBpp0082525; MD5=07bf78593c116a7333afb2ac44879525; length=274; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRNRGKGK KGGGGPYRNV KANHNCARSF AQQANELASS SSSENESSDS ESSGDGAQND  60
   61 LGQPPEFAVA MWDLNHCDPK KCSGRKLARL GLISNLRLGQ KFPGLVLSPV GQLCVSPLDR 120
  121 DVVASSGVAV IDCSWAKLDE TPFGRMRSPH PRLLPFLVAA NPINYGKPCK LSCVEAIAAT 180
  181 LYICGFTEEA RWFLGKFSWG HAFLELNDKL LNAYAACKSS DEIVKVQNEY LEKEQQERDK 240
  241 PRDLRDFYPT SSSSSSSETE TEGDDEDTKA KPKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] deduced N/A No confident structure predictions are available.
    2 View Details [64..274] Pfam 95.408935 No description for PF04034.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle