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Protein Overview: FBpp0308013, Abi...

General Information:
Name(s) found: FBpp0308013 [FlyBase]
Abi-PB / FBpp0111809 [FlyBase]
Abi-PA / FBpp0082371 [FlyBase]
Description(s) found:
Found 40 descriptions.
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  • type=protein; loc=3R:complement(9945787..9945950,9946007..9946194,9946417..9946507,9946569..9947191,9947468..9947823); ID=FBpp0308013; name=Abi-PF; parent=FBgn0020510,FBtr0337097; dbxref=REFSEQ:NP_001262560,GB_protein:AGB95941,FlyBase:FBpp0308013,FlyBase_Annotation_IDs:CG9749-PF; MD5=c5316238e274471c0e3fa385afe20c79; length=473; release=r5.56; species=Dmel; [FlyBase]
  • The gene Abelson interacting protein is referred to in FlyBase by the symbol Dmel\Abi (CG9749, FBgn0020510). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9944982..9948142. It has the cytological map location 88A9. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence for 12 unique biological process</span> terms, many of which group under: anatomical structure development; cell projection organization; actin filament-based process; cell projection assembly; organelle organization; organ development; muscle organ development; transport; regulation of kinase activity; cell adhesion; regulation of developmental process. 18 alleles are reported. The phenotypes of these alleles are annotated with: dorsocentral bristle; chaeta; longitudinal connective; scutellar bristle; sensory mother cell. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene Abelson interacting protein is referred to in FlyBase by the symbol Dmel\Abi (CG9749, FBgn0020510). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9944982..9948142. It has the cytological map location 88A9. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence for 12 unique biological process</span> terms, many of which group under: anatomical structure development; cell projection organization; actin filament-based process; cell projection assembly; organelle organization; organ development; muscle organ development; transport; regulation of kinase activity; cell adhesion; regulation of developmental process. 18 alleles are reported. The phenotypes of these alleles are annotated with: dorsocentral bristle; chaeta; longitudinal connective; scutellar bristle; sensory mother cell. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: perinuclear region of cytoplasm [IDA]
    lamellipodium membrane [IDA]
    Biological Process: cortical actin cytoskeleton organization [IMP]
    regulation of cell shape [IMP]
    neuromuscular junction development [IGI]
    phagocytosis, engulfment [IMP]
    central nervous system neuron axonogenesis [IMP]
    positive regulation of protein kinase activity [IDA]
    cell projection assembly [IMP]
    lamellipodium assembly [IMP]
    cell adhesion [IMP]
    bristle development [IMP]
    actin cytoskeleton organization [IMP]
    muscle attachment [IMP]
    Molecular Function: protein binding [IPI]
    signal transducer activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTETPMASE NIMDELASLI RTEIPDGRQS LRDSYTNLER VADYCEDTYY RADNKKAALE  60
   61 ATKNYTTQSL ASVAYQINTL AYSYMQLLEL QAQQLGEMES QMNHIAQTVH IHKEKVARRE 120
  121 IGVLTANKVS SRQFKIVAPI NPEKPIKYVR KPIDYSMLDE IGHGINSAQH SQVRQKHRGS 180
  181 SHGSVQSLLP PSVGPPPTTK PPTPPQMSRA GNTGTLGKSV SNTGTLGKSS REYRTPPVVN 240
  241 PPQVPSHYAP NYPIGHPKRM STASSTMTTT TTGGGAAGNE RAAGYSALPM PPSQQIATHV 300
  301 NLPSAGMMQS LPPPPPTTYD DRSSMPPAPP SPLTVSQHEM TEQSHIGMHT LGRNINRNHF 360
  361 SLNFARPGSQ SPPLPPPPPP EDEHQDFGRP RTSTGPQLAP IVPEDQNLPG WVPKNFIEKV 420
  421 VAIYDYYADK DDELSFQESS VLYVLKKNDD GWWEGVMDGV TGLFPGNYVE PCV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 21.522879 RBP1
    2 View Details [249..473] PSI-BLAST 4.69897 NMR STRUCTURE OF THE TUMOR SUPPRESSOR BIN1: ALTERNATIVE SPLICING IN MELANOMA AND INTERACTION WITH C-MYC


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle