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Protein Overview: ninaB-PA

General Information:
Name(s) found: ninaB-PA / FBpp0082288 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • The gene neither inactivation nor afterpotential B is referred to in FlyBase by the symbol Dmel\ninaB (CG9347, FBgn0002937). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9526308..9528844. It has the cytological map location 87F11. There is experimental evidence that it has the molecular function</span>: beta-carotene 15,15'-monooxygenase activity. There is experimental evidence that it is involved in the biological process</span>: carotene metabolic process; rhodopsin biosynthetic process; phototransduction, UV; vitamin biosynthetic process; phototransduction, visible light; vitamin A biosynthetic process. 7 alleles are reported. The phenotypes of these alleles are annotated with: photoreceptor cell R7; photoreceptor cell R2; eye; photoreceptor cell R1; photoreceptor cell R6; photoreceptor cell R5; photoreceptor cell R4; photoreceptor cell R8; photoreceptor cell R3. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 620 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phototransduction, visible light [IMP]
    carotene metabolic process [IDA]
    phototransduction, UV [IMP]
    rhodopsin biosynthetic process [IMP]
    vitamin biosynthetic process [IMP]
    phototransduction [TAS]
    vitamin A biosynthetic process [IDA][IMP]
    Molecular Function: beta-carotene 15,15'-monooxygenase activity [IDA][IMP][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGVFKSFM RDFFAVKYDE QRNDPQAERL DGNGRLYPNC SSDVWLRSCE REIVDPIEGH  60
   61 HSGHIPKWIC GSLLRNGPGS WKVGDMTFGH LFDCSALLHR FAIRNGRVTY QNRFVDTETL 120
  121 RKNRSAQRIV VTEFGTAAVP DPCHSIFDRF AAIFRPDSGT DNSMISIYPF GDQYYTFTET 180
  181 PFMHRINPCT LATEARICTT DFVGVVNHTS HPHVLPSGTV YNLGTTMTRS GPAYTILSFP 240
  241 HGEQMFEDAH VVATLPCRWK LHPGYMHTFG LTDHYFVIVE QPLSVSLTEY IKAQLGGQNL 300
  301 SACLKWFEDR PTLFHLIDRV SGKLVQTYES EAFFYLHIIN CFERDGHVVV DICSYRNPEM 360
  361 INCMYLEAIA NMQTNPNYAT LFRGRPLRFV LPLGTIPPAS IAKRGLVKSF SLAGLSAPQV 420
  421 SRTMKHSVSQ YADITYMPTN GKQATAGEES PKRDAKRGRY EEENLVNLVT MEGSQAEAFQ 480
  481 GTNGIQLRPE MLCDWGCETP RIYYERYMGK NYRYFYAISS DVDAVNPGTL IKVDVWNKSC 540
  541 LTWCEENVYP SEPIFVPSPD PKSEDDGVIL ASMVLGGLND RYVGLIVLCA KTMTELGRCD 600
  601 FHTNGPVPKC LHGWFAPNAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..519] PSI-BLAST 82.39794 Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme
    2 View Details [520..620] FFAS03 6.27 Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle