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Protein Overview: f-cup-PB

General Information:
Name(s) found: f-cup-PB / FBpp0082312 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene flyers-cup is referred to in FlyBase by the symbol Dmel\f-cup (CG9611, FBgn0028487). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9520979..9526560. It has the cytological map location 87F11. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: Ras protein signal transduction. 3 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 650 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: Ras protein signal transduction [ISS]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKTGRGRS NPSTSRIPRS AQSPRQASVV HSPRTNCAFR PIFHERSTHE DDQVLTQELW  60
   61 KLARKSGTLN LSNKALARVP KRLYDINEAD ADSKAVNLEQ LTIKEEDAWW NQVPLNNLDL 120
  121 SSNTLTHISP KIENLQSLTV LTLHDNALVE LPPEIGKLEK LVRLNVSHNK LSQLPRAMYS 180
  181 LPELRHLNIS YNEFVELNPD ISDLHMLEFL DGGHNNIQSL PGGIGFLVRL TALLLPYNHI 240
  241 KELPPDLVNM RSLQKIDLMH NDLTSLPEDM GLLRKLDCLY LQHNDILELP EFEGNEALNE 300
  301 LHASNNFIKI IPKAMCSNLP HLKILDLRDN KITELPDELC LLRNLNRLDV SNNTISVLPV 360
  361 TLSSLAHLIS LQVEGNPIKT IRRDILQCGT TRILKTLHDR AVAKAKEEGG GVDDASTSAG 420
  421 ISVTRLRGGQ MDDGDIPGNF PDRYKLRHTR TLAVNLEELT SVPDQVFQIA RDEGVHVVDF 480
  481 ARNQLSTLPN GLQHMKDLVT ELVLSNNVIG YVPQFISQFT RISFLNLSNN LLNDLPTEFG 540
  541 VLNTLRELNI ANNRFPCIPN CVYELQGLEI LIASENHIKM LNVSGLQNMR RLSTLDLRNN 600
  601 DIETVPPILG NLTNITHLEL VGNPFRQPRH QILMKGTDAI MSYLRDRIPT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..650] PSI-BLAST 47.0 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle