| Protein: | f-cup-PB |
| Organism: | Drosophila melanogaster |
| Length: | 650 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for f-cup-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
441.0 | [0..3] | [649..128] |
|
Region A: Residues: [1-650] |
1 11 21 31 41 51
| | | | | |
1 MSDKTGRGRS NPSTSRIPRS AQSPRQASVV HSPRTNCAFR PIFHERSTHE DDQVLTQELW 60
61 KLARKSGTLN LSNKALARVP KRLYDINEAD ADSKAVNLEQ LTIKEEDAWW NQVPLNNLDL 120
121 SSNTLTHISP KIENLQSLTV LTLHDNALVE LPPEIGKLEK LVRLNVSHNK LSQLPRAMYS 180
181 LPELRHLNIS YNEFVELNPD ISDLHMLEFL DGGHNNIQSL PGGIGFLVRL TALLLPYNHI 240
241 KELPPDLVNM RSLQKIDLMH NDLTSLPEDM GLLRKLDCLY LQHNDILELP EFEGNEALNE 300
301 LHASNNFIKI IPKAMCSNLP HLKILDLRDN KITELPDELC LLRNLNRLDV SNNTISVLPV 360
361 TLSSLAHLIS LQVEGNPIKT IRRDILQCGT TRILKTLHDR AVAKAKEEGG GVDDASTSAG 420
421 ISVTRLRGGQ MDDGDIPGNF PDRYKLRHTR TLAVNLEELT SVPDQVFQIA RDEGVHVVDF 480
481 ARNQLSTLPN GLQHMKDLVT ELVLSNNVIG YVPQFISQFT RISFLNLSNN LLNDLPTEFG 540
541 VLNTLRELNI ANNRFPCIPN CVYELQGLEI LIASENHIKM LNVSGLQNMR RLSTLDLRNN 600
601 DIETVPPILG NLTNITHLEL VGNPFRQPRH QILMKGTDAI MSYLRDRIPT
|
| Detection Method: |  |
| Confidence: | 47.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
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