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Protein Overview: CG10909-PA

General Information:
Name(s) found: CG10909-PA / FBpp0082153 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG10909 (CG10909, FBgn0038090). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:8735842..8737014. It has the cytological map location 87D4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: RNA binding; methyltransferase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: rRNA processing. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: small nuclear ribonucleoprotein complex [ISS]
    Biological Process: tRNA processing [IEA]
    rRNA processing [ISS]
    Molecular Function: RNA binding [IEA]
    methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMESKSKRR SPPSSTLEEE VPGKTIHPED PKITSKNFEN PTKETSIQSP IKNSIKPSWN  60
   61 PEPKITRTSI WDIESAGGDS IQNDCQSECN VEDQGHEQEV TLETRIFSGT SDRIEPHRHY 120
  121 GVYLLRNRFD AIQLLTRNTS SSADDYGERR VISEYREMRC EFRVWSPFQS KLAAGIMGGV 180
  181 SDLHLQIGSK VLYLGAGFGR SVSHISDIVG DSGMVYAVEQ IPWAGRQLTI MANRRSNIVP 240
  241 IVEDATMPYK YRYEVPACID IIFADLPPSV LIRALMLNAR HFLNPGGHFV AYLHSPTSQG 300
  301 VVFNKDSFAA ERRLLKEKQL EPKEMVLLEP FKAGYAFVVG VYIRKDVSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] deduced N/A No confident structure predictions are available.
    2 View Details [120..349] PSI-BLAST 55.09691 No description for 2ipxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle