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View Structure Prediction Details

Protein: CG10909-PA
Organism: Drosophila melanogaster
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10909-PA.

Description E-value Query
Range
Subject
Range
gi|65304424 - gi|65304424|emb|CAI76803.1| fibrillarin, putative [Theileria annulata]
gi|84997413 - gi|84997413|ref|XP_953428.1| fibrillarin [Theileria annulata strain Ankara]
234.0 [0..75] [348..32]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMESKSKRR SPPSSTLEEE VPGKTIHPED PKITSKNFEN PTKETSIQSP IKNSIKPSWN  60
   61 PEPKITRTSI WDIESAGGDS IQNDCQSECN VEDQGHEQEV TLETRIFSGT SDRIEPHRH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGVYLLRNRF DAIQLLTRNT SSSADDYGER RVISEYREMR CEFRVWSPFQ SKLAAGIMGG  60
   61 VSDLHLQIGS KVLYLGAGFG RSVSHISDIV GDSGMVYAVE QIPWAGRQLT IMANRRSNIV 120
  121 PIVEDATMPY KYRYEVPACI DIIFADLPPS VLIRALMLNA RHFLNPGGHF VAYLHSPTSQ 180
  181 GVVFNKDSFA AERRLLKEKQ LEPKEMVLLE PFKAGYAFVV GVYIRKDVSL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.09691
Match: 2ipxA
Description: No description for 2ipxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle