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View Structure Prediction Details

Protein: CG10909-PA
Organism: Drosophila melanogaster
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10909-PA.

Description E-value Query
Range
Subject
Range
gi|65304424 - gi|65304424|emb|CAI76803.1| fibrillarin, putative [Theileria annulata]
gi|84997413 - gi|84997413|ref|XP_953428.1| fibrillarin [Theileria annulata strain Ankara]
234.0 [0..75] [348..32]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMESKSKRR SPPSSTLEEE VPGKTIHPED PKITSKNFEN PTKETSIQSP IKNSIKPSWN  60
   61 PEPKITRTSI WDIESAGGDS IQNDCQSECN VEDQGHEQEV TLETRIFSGT SDRIEPHRH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGVYLLRNRF DAIQLLTRNT SSSADDYGER RVISEYREMR CEFRVWSPFQ SKLAAGIMGG  60
   61 VSDLHLQIGS KVLYLGAGFG RSVSHISDIV GDSGMVYAVE QIPWAGRQLT IMANRRSNIV 120
  121 PIVEDATMPY KYRYEVPACI DIIFADLPPS VLIRALMLNA RHFLNPGGHF VAYLHSPTSQ 180
  181 GVVFNKDSFA AERRLLKEKQ LEPKEMVLLE PFKAGYAFVV GVYIRKDVSL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.09691
Match: 2ipxA
Description: No description for 2ipxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle