YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: kar-PA

General Information:
Name(s) found: kar-PA / FBpp0082135 [FlyBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • The gene karmoisin is referred to in FlyBase by the symbol Dmel\kar (CG12286, FBgn0001296). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:8507908..8515089. It has the cytological map location 87C5. Based on sequence similarity, it is predicted to have molecular function</span>: monocarboxylic acid transmembrane transporter activity. There is experimental evidence that it is involved in the biological process</span>: ommochrome biosynthetic process. 32 alleles are reported. The phenotypes of these alleles are annotated with: Malpighian tubule; ocellus; ocellus pigment granule; pigment cell. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 553 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [ISS]
    Biological Process: transmembrane transport [IEA]
    ommochrome biosynthetic process [IMP]
    Molecular Function: monocarboxylic acid transmembrane transporter activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENEPLNDL QSQVNGRILP AANGHTASAT NGLVHANGKD AMKPSAPVQN GNGNANGTHI  60
   61 EAPCCRDIHG KEPPDGGARA WLVMVSAFLC NGIIFGFINT YGVIHSLLTD RLTKLGDPEA 120
  121 SSKAALIGAL AIGTTFLFST MAGCLTDKIG LRLTTFAGGV LSAGGLLLSS FCTENIGALY 180
  181 FTYGIMFGLG AALAYTPTLA ILGHYFKRYL GKVSGFVTAG SSVFTVILPP CLDKLLGSYG 240
  241 LEGTLRIMSL VSAFIILCSF VYKPLHPPPE PPKKKPGRSR INLFLRSIIN VEIWKRKRFV 300
  301 IWALCVPLAL FGYFVPYVHM MQFVKTTFPG EDVNLPVMCI GITSGIGRLI FGVIADMPGV 360
  361 NRMYLQQLSL VSIGLVTLLL PLTNSYVILV SFTLVMGLFD GCFISLLGPI AYEICGPSGA 420
  421 TQAIGFLLGL SSIPLTVGPP VAGMIFDSTN SYTLPLILAG LPPLLGSSLL FLIKCVKEEE 480
  481 NGVSAPRAVV LANGDIEIAG NGHYRSAGTK SSAPLMGATN GINGSAPASP TIQSNGHVDN 540
  541 GTGKLAVTNG SAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..553] PSI-BLAST 43.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.818732184064642 bayes_pls_golite062009
  • transporter activity
    		•  0.19062802653084 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.137083982682827 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.045313910574645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle