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Protein Overview: CG4860-PA

General Information:
Name(s) found: CG4860-PA / FBpp0082092 [FlyBase]
Description(s) found:
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  • gi|7299576|gb|AAF54761.1| CG4860 [Drosophila melanogaster] [NCBI NR]
  • gi|24646207|ref|NP_650163.2| CG4860 [Drosophila melanogaster] [NCBI NR]
  • gi|21064323|gb|AAM29391.1| RE05302p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG4860 (CG4860, FBgn0037999). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:8045603..8047185. It has the cytological map location 87B2. Based on sequence similarity, it is predicted to have molecular function</span>: acyl-CoA dehydrogenase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4860-PA translation from_gene[CG4860 CG4860 FBgn0037999] seq_release:3 mol_weight=44881 cds_boundaries:(3R:8,045,756..8,047,191[-]) aa_length:415 transcript_info:[CG4860-RA seq_release:3] gene_info:[gene symbol:CG4860 FBgn0037999 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VGC2) CG4860 protein (RE05302p) [DrosMelano7227.FASTAC.txt]
  • (AE003695) CG4860 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4860-PA [Drosophila melanogaster]gi|21064323|gb|AAM29391.1| RE05302p [Drosophila melanogaster]gi|24646207|ref|NP_650163.2| CG4860-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(8045734..8046707,8046838..8047077,8047139..8047172); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_prot [fly-100309-contam.fasta]
  • RE05302p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4860-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(8045734..8046707,8046838..8047077,8047139..8047172); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(8045734..8046707,8046838..8047077,8047139..8047172); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG4860 OS=Drosophila melanogaster GN=CG4860 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(8045734..8046707,8046838..8047077,8047139..8047172); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761,FlyMine:FBpp0082092,modMine:FBpp0082092; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(12221417..12221450,12221116..12221355,12220012..12220985)); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761,FlyMine:FBpp0082092,modMine:FBpp0082092; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(12221417..12221450,12221116..12221355,12220012..12220985)); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761,FlyMine:FBpp0082092,modMine:FBpp0082092; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG4860 OS=Drosophila melanogaster GN=CG4860 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0082092 type=protein; loc=3R:complement(join(12221417..12221450,12221116..12221355,12220012..12220985)); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761,FlyMine:FBpp0082092,modMine:FBpp0082092; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(12221417..12221450,12221116..12221355,12220012..12220985)); ID=FBpp0082092; name=CG4860-PA; parent=FBgn0037999,FBtr0082623; dbxref=FlyBase:FBpp0082092,FlyBase_Annotation_IDs:CG4860-PA,GB_protein:AAF54761.1,REFSEQ:NP_650163,GB_protein:AAF54761,UniProt/TrEMBL:Q9VGC2,FlyMine:FBpp0082092,modMine:FBpp0082092; MD5=0270e820fe7f41da8af82e1efbb5214e; length=415; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxidation reduction [IEA]
    Molecular Function: acyl-CoA dehydrogenase activity [ISS]
    FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQLIRVART LGQRSSGAWS ARIIAGGNRG IACLAALSET HQILQKTCRE FANAELAPKA  60
   61 RHHDREELYP AEQVRRLGEL GLMSVTVREE YGGSGLDYQA YAIGMEEVAR GDAAVSIVMG 120
  121 VNNLYLGAVQ QHGTEQQKQD FLVPYTQGEH IAFYALSEPG NGSDAGAAST TAKLQGDSYQ 180
  181 INGTKAWISN SKEASGGIVF ATVDKSMKHK GITAFLTPKD VPGLSIAKKE SKMGMRATST 240
  241 CQLVLEDVHV PRSRVLGAAG DGFKIAMQSL DCGRIGIAAQ ATGIAQAALE LAVDYSQKRV 300
  301 AFGKHLARLQ LIQQKLADMA TRVEISRLLT WRAAWLKDNG LPITKEAAMA KLHASESATF 360
  361 CAHQCIQILG GMGYTTDLPA ELYYRNARVT EIYEGTSEIQ RIVIANAVLR ELGKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..415] PSI-BLAST 119.0 Butyryl-CoA dehydrogenase, C-domain; Butyryl-CoA dehydrogenase, NM domains


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle