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Protein Overview: wkd-PB, wkd-PA

General Information:
Name(s) found: wkd-PB / FBpp0081890 [FlyBase]
wkd-PA / FBpp0081889 [FlyBase]
Description(s) found:
Found 34 descriptions.
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  • The gene whacked is referred to in FlyBase by the symbol Dmel\wkd (CG5344, FBgn0037917). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7407301..7411027. It has the cytological map location 86E11. Based on sequence similarity, it is predicted to have molecular function</span>: Rab GTPase activator activity. It is reported to be involved in the biological process</span>: terminal branching, open tracheal system. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene whacked is referred to in FlyBase by the symbol Dmel\wkd (CG5344, FBgn0037917). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7407301..7411027. It has the cytological map location 86E11. Based on sequence similarity, it is predicted to have molecular function</span>: Rab GTPase activator activity. It is reported to be involved in the biological process</span>: terminal branching, open tracheal system. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: terminal branching, open tracheal system [NAS]
    regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAPRSLDT ISLCSTVSSC PDRNGFYGGF QRTDKPKEPL SKAQIIAREK KWLYMIDNWS  60
   61 IYMSKNYKKI RDRCRKGIPK SVRPKAWFYL SGAYLLKKKN PNVYNELLEK PGNPTTIEEI 120
  121 KKDKHRQFPF HEMFLDEQKV GQIELFNVLK AYSIYNPKVG FCQAQAPIAA FLLMHLPAED 180
  181 AFWVFVSVCD VYLQDYFIPG LEVIQNDAGI LEGLLKKTCP PVYRHLQKHK VEPLLYMTDW 240
  241 FLCAMTRTLP WETLLRVWDC FLAEGIRVIF KVALVIIGAS LSRHKVRKTC TGLCETLAVL 300
  301 RSPEEHIVEE EFIINNMMRL NLRVEDFQIE HTRQKARRAK QKAQQEAESS GSGNGHRRNM 360
  361 PTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 42.30103 No description for 2qq8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle