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Protein Overview: sals-PB, sals-PC

General Information:
Name(s) found: sals-PC / FBpp0081877 [FlyBase]
sals-PB / FBpp0081875 [FlyBase]
Description(s) found:
Found 30 descriptions.
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  • The gene sarcomere length short is referred to in FlyBase by the symbol Dmel\sals (CG31374, FBgn0051374). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7263269..7276872. It has the cytological map location 86E5-86E6. There is experimental evidence that it has the molecular function</span>: actin filament binding. There is experimental evidence that it is involved in the biological process</span>: regulation of sarcomere organization; positive regulation of actin filament polymerization. 18 alleles are reported. The phenotypes of these alleles are annotated with: striated muscle thin filament; myofibril; sarcomere. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • The gene sarcomere length short is referred to in FlyBase by the symbol Dmel\sals (CG31374, FBgn0051374). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7263269..7276872. It has the cytological map location 86E5-86E6. There is experimental evidence that it has the molecular function</span>: actin filament binding. There is experimental evidence that it is involved in the biological process</span>: regulation of sarcomere organization; positive regulation of actin filament polymerization. 18 alleles are reported. The phenotypes of these alleles are annotated with: striated muscle thin filament; myofibril; sarcomere. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 935 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of sarcomere organization [IMP]
    positive regulation of actin filament polymerization [IMP]
    Molecular Function: actin filament binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFVTPRAGT SSASSAPGGR TTFRPPWVKD DGGTSGTSST TKPTATPWAK KTATTTTASP  60
   61 ATKENGEKPT VAKPKATATT TAAARKTSTP EPAKKTIEPV KKSSLATSTT AAKKTPEPVN 120
  121 TKKAPEPIKK VAPTVGPKKP VATTSALKKK KEPTPPPESS SEEEESEEEE ETEEETESEE 180
  181 EESEEESESE EEESEEEDTT VDEKVPEHVK KAAQLRPTTV NKKPEPESEL TQRFTMEKPK 240
  241 LRSVVVKRDK SLKKMATEDD DEAEEGETEE ERDRRRRFKL EKPKLRHVKR EEKPLPSKST 300
  301 DDLAKIRPVL KKVPKIDELL KEPKEEPKPE FTTKTLRKAS IKREPSIKSV PAPPPLPSLV 360
  361 PKAPPPPPPP LAPGEKRVLS STQKETLEKL RTRPRRRPDW SEMMKEVESG KKLRHVACND 420
  421 RSQPILTCKS ITKLDDKFIY ETEKGNSHNK LLKQIQGGIK LKPTKTNDRS KPVLDGLRKF 480
  481 RRQMTIEEQL QKSQSKINML SEAPSSHALG PGSATALGAG GSRPSIVSAM SIDEESPDEL 540
  541 DDIDKIRDDL QSTKQMLALE LRNREAQDRE NKKLLAKIRT LETELEREKS REKNLEYGSN 600
  601 VIVATMDPTP TAEQTYVNSL KREVEDARKV SKEVEQNYQS TAEQLVEAKT EIEEQRRQIQ 660
  661 LLERKLAAAL QATPSTNRPH ISNCFAYDDD DYDDCFHYDH YHAARHQGGG SLDGSRRPSD 720
  721 ANFGRDSSPE LEPEVSESDP DEPEEKKVER RERRSGKELK ILRSKLTKLK VKEEAAKKEK 780
  781 DALKQAMKKN QSILKEENKK FKKLEKEVQK MAASMKLDED DVDGEEKDED EEEAEEEHAS 840
  841 EEEEESDDES EESESEESEA ETGSESEPED SPNSAKKANV EPRVKKHESR FAAMKKCNVL 900
  901 LQANVDNLQD QIVQVRSRAT NLQDELDAVI ADLGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] FFAS03 1.36 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
    2 View Details [124..317] FFAS03 0.955 No description for 2j63A was found.
    3 View Details [318..686] PSI-BLAST 22.30103 Heavy meromyosin subfragment
    4 View Details [687..774] deduced N/A No confident structure predictions are available.
    5 View Details [775..935] PSI-BLAST 5.522879 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle