Description(s) found:
SHOW ONLY BEST
|
gi|28573089|ref|NP_788637.1| CG31374, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|28381247|gb|AAO41543.1| CG31374, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|24645942|ref|NP_731573.1| CG31374, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|23170995|gb|AAF54642.2| CG31374, isoform B [Drosophila melanogaster]
[NCBI NR]
The gene sarcomere length short is referred to in FlyBase by the symbol Dmel\sals (CG31374, FBgn0051374). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7263269..7276872. It has the cytological map location 86E5-86E6. There is experimental evidence that it has the molecular function</span>: actin filament binding. There is experimental evidence that it is involved in the biological process</span>: regulation of sarcomere organization; positive regulation of actin filament polymerization. 18 alleles are reported. The phenotypes of these alleles are annotated with: striated muscle thin filament; myofibril; sarcomere. It has 4 annotated transcripts and 4 annotated polypeptides.
[FlyBase]
>CG31374-PB translation from_gene[CG31374 CG31374 FBgn0051374] seq_release:3 mol_weight=104908 cds_boundaries:(3R:7,263,624..7,273,906[-]) aa_length:935 transcript_info:[CG31374-RB seq_release:3] gene_info:[gene symbol:CG31374 synonyms:[CG6771 CG14703]
[hmr_yeast5_DM3-1_pombe.fasta]
>CG31374-PC translation from_gene[CG31374 CG31374 FBgn0051374] seq_release:3 mol_weight=104908 cds_boundaries:(3R:7,263,624..7,273,906[-]) aa_length:935 transcript_info:[CG31374-RC seq_release:3] gene_info:[gene symbol:CG31374 synonyms:[CG6771 CG14703]
[hmr_yeast5_DM3-1_pombe.fasta]
(Q9VGN4) CG31374 protein
[DrosMelano7227.FASTAC.txt]
CG31374-PC, isoform C [Drosophila melanogaster]gi|23170995|gb|AAF54642.2| CG31374-PB, isoform B [Drosophila melanogaster]gi|28573089|ref|NP_788637.1| CG31374-PC [Drosophila melanogaster]gi|24645942|ref|NP_731573.1| CG31374-PB [Drosophila melanogaster]
[nrdb_11152004_Chlamydomonas]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081877; name=CG31374-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0
[fly-100309-contam.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081875; name=CG31374-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0
[fly-100309-contam.fasta]
CG31374-PC, isoform C [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG31374-PB, isoform B [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081877; name=CG31374-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081875; name=CG31374-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081877; name=CG31374-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081875; name=CG31374-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
CG31374, isoform B OS=Drosophila melanogaster GN=sals PE=2 SV=2
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081877; name=sals-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543,FlyMine:FBpp0081877,modMine:FBpp0081877; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:complement(7263603..7263803,7263865..7264087,7264146..7264408,7264502..7264609,7265607..7266357,7266618..7266707,7266845..7266968,7272841..7273888); ID=FBpp0081875; name=sals-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081877; name=sals-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543,FlyMine:FBpp0081877,modMine:FBpp0081877; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081875; name=sals-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081877; name=sals-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543,FlyMine:FBpp0081877,modMine:FBpp0081877; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081875; name=sals-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
Sarcomere length short, isoform B OS=Drosophila melanogaster GN=sals PE=1 SV=2
[DROME.fasta.20160308]
FBpp0081877 type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081877; name=sals-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543,FlyMine:FBpp0081877,modMine:FBpp0081877; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0081875 type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081875; name=sals-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081877; name=sals-PC; parent=FBgn0051374,FBtr0082401; dbxref=FlyBase:FBpp0081877,FlyBase_Annotation_IDs:CG31374-PC,GB_protein:AAO41543.1,REFSEQ:NP_788637,GB_protein:AAO41543,UniProt/TrEMBL:Q9VGN4,FlyMine:FBpp0081877,modMine:FBpp0081877; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=3R:complement(join(11447119..11448166,11441123..11441246,11440896..11440985,11439885..11440635,11438780..11438887,11438424..11438686,11438143..11438365,11437881..11438081)); ID=FBpp0081875; name=sals-PB; parent=FBgn0051374,FBtr0082399; dbxref=FlyBase:FBpp0081875,FlyBase_Annotation_IDs:CG31374-PB,GB_protein:AAF54642.2,REFSEQ:NP_731573,GB_protein:AAF54642,UniProt/TrEMBL:Q9VGN4; MD5=249573aca89512a9b62dd405401aa5dc; length=935; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|