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Protein Overview: SelR-PC

General Information:
Name(s) found: SelR-PC / FBpp0081771 [FlyBase]
Description(s) found:
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  • gi|24645799|ref|NP_731522.1| SelR, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|23170947|gb|AAN13490.1| SelR, isoform C [Drosophila melanogaster] [NCBI NR]
  • The gene SelR is referred to in FlyBase by the symbol Dmel\SelR (CG6584, FBgn0037847). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:6689071..6694379. It has the cytological map location 86C7. There is experimental evidence that it has the molecular function</span>: protein-methionine-R-oxide reductase activity; zinc ion binding. It is reported to be involved in the biological process</span>: peptidyl-methionine modification. One allele is reported. No phenotypic data is available. It has 7 annotated transcripts and 7 annotated polypeptides. [FlyBase]
  • >CG6584-PC translation from_gene[CG6584 SelR FBgn0037847] seq_release:3 mol_weight=22200 cds_boundaries:(3R:6,689,378..6,693,781[-]) aa_length:197 transcript_info:[CG6584-RC seq_release:3] gene_info:[gene symbol:SelR FBgn0037847 gene_boundaries:(3R:6,6 [hmr_yeast5_DM3-1_pombe.fasta]
  • CG6584-PC, isoform C [Drosophila melanogaster]gi|24645799|ref|NP_731522.1| CG6584-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(6689357..6689547,6692251..6692415,6692531..6692698,6693694..6693763); ID=FBpp0081771; name=SelR-PC; parent=FBgn0037847,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,REFSEQ:NP_731522,GB_protein:AAN [fly-100309-contam.fasta]
  • CG6584-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • SelR CG6584-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(6689357..6689547,6692251..6692415,6692531..6692698,6693694..6693763); ID=FBpp0081771; name=SelR-PC; parent=FBgn0037847,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,REFSEQ:NP_731522,GB_protein:AAN13490; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(6689357..6689547,6692251..6692415,6692531..6692698,6693694..6693763); ID=FBpp0081771; name=SelR-PC; parent=FBgn0037847,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,GB_protein:AAN13490,REFSEQ:NP_731522; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Isoform C of Methionine-R-sulfoxide reductase B1 OS=Drosophila melanogaster GN=SelR [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(6689357..6689547,6692251..6692415,6692531..6692698,6693694..6693763); ID=FBpp0081771; name=SelR-PC; parent=FBgn0037847,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,GB_protein:AAN13490,REFSEQ:NP_731522,FlyMine:FBpp0081771,modMine:FBpp0081771; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(10867972..10868041,10866809..10866976,10866529..10866693,10863635..10863825)); ID=FBpp0081771; name=SelR-PC; parent=FBgn0267376,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,GB_protein:AAN13490,REFSEQ:NP_731522,FlyMine:FBpp0081771,modMine:FBpp0081771; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(10867972..10868041,10866809..10866976,10866529..10866693,10863635..10863825)); ID=FBpp0081771; name=SelR-PC; parent=FBgn0267376,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,GB_protein:AAN13490,REFSEQ:NP_731522,FlyMine:FBpp0081771,modMine:FBpp0081771; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8INK9, Isoform C of Methionine-R-sulfoxide reductase B1 OS=Drosophila melanogaster GN=SelR [DROME.fasta.20160308]
  • FBpp0081771 type=protein; loc=3R:complement(join(10867972..10868041,10866809..10866976,10866529..10866693,10863635..10863825)); ID=FBpp0081771; name=SelR-PC; parent=FBgn0267376,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,GB_protein:AAN13490,REFSEQ:NP_731522,FlyMine:FBpp0081771,modMine:FBpp0081771; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(10867972..10868041,10866809..10866976,10866529..10866693,10863635..10863825)); ID=FBpp0081771; name=SelR-PC; parent=FBgn0267376,FBtr0082294; dbxref=FlyBase_Annotation_IDs:CG6584-PC,FlyBase:FBpp0081771,GB_protein:AAN13490,REFSEQ:NP_731522,FlyMine:FBpp0081771,modMine:FBpp0081771; MD5=9c667e100e96f14bd79a7809bebbea8b; length=197; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 197 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFALSARHAL RRTRIFAIPR FFADSRQDSD NPDKRYSGPA ATMDNKSEKV TVNKEELRKR  60
   61 LTPVQYQVTQ EAGTERPFTG CYNKHYEKGV YQCIVCHQDL FSSETKYDSG CGWPAFNDVL 120
  121 DKGKVTLHRD ASIPERIRTE VRCARCNAHM GHVFEDGPKP TRKRYCINSA SIEFVNADPA 180
  181 TSSPPVATPT AAPIAQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 53.30103 Solution NMR Structure of Methionine Sulfoxide Reductase B Using Minimal Constraint Strategy; Northeast Structural Genomics Target SR10

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor
    		•  5.90194589149201 bayes_pls_golite062009
  • protein-methionine-R-oxide reductase activity
    		•  5.64196103816384 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  3.02342037380774 bayes_pls_golite062009
  • peptide-methionine-(S)-S-oxide reductase activity
    		•  1.80676476343543 bayes_pls_golite062009
  • binding
    		•  1.67290562818139 bayes_pls_golite062009
  • catalytic activity
    		•  0.566791077255496 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.555078494441175 bayes_pls_golite062009
  • cation binding
    		•  0.491281675380108 bayes_pls_golite062009
  • metal ion binding
    		•  0.491281675380108 bayes_pls_golite062009
  • ion binding
    		•  0.484162333942196 bayes_pls_golite062009
  • DNA binding
    		•  0.215568693193579 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.183261590647643 bayes_pls_golite062009
  • protein binding
    		•  0.0755837372617499 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle