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Protein Overview: CG4089-PA

General Information:
Name(s) found: CG4089-PA / FBpp0081758 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG4089 (CG4089, FBgn0037838). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:6641013..6643214. It has the cytological map location 86C7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: tubulin-tyrosine ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein modification process. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 516 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: tubulin-tyrosine ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASVVENAP NQKEVDGKMA TTEESEKPSN SIGLLPIMIF LAATVATAVV VEVLPHASRV  60
   61 FPWKLADSSA DQLQPPPTYA IFGRSPTEEH LVHVVNVLHK FGYKRVGVND SWNLLWAHDY 120
  121 PFLSFANLKN LGQHQVVNHY PGCGYLTNKV DLCTTQLPFL PRAFRLPAER EEFLDYAREN 180
  181 PQALFVQKHN EHRHIKVRAP ADIAFGSNDS FVQEFVQRPY LVDGHKFDIG VYVVITSVNP 240
  241 LRVYIYTGDV LFRYCPVKYH PFDAENVDKY IVGDDYLPTW EVPSLRKYYN RFGGSMRTVF 300
  301 EAYVRDQGKD PAQIWPQVEH IVRTTIAAKE KDIVNILRSY RTHNFFDLMR FDLFIDEDLK 360
  361 VFLMEANMSP NLSSAHFKPN SLLYEQVLYS VFNLVGIRPL TSTSGALLGE SSEMITTDKN 420
  421 LSTDLNKCAA HDCDKSCNKE ECDLCLQCLS GSEYKMLQQA HQEHLHRVDM KRIFPKPIRD 480
  481 PMRFDVMAET ANMSKKNAWM TRWFHNKCQF DAVWCN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..424] FFAS03 1.12 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    2 View Details [425..516] MSA 5.134995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.76250499250332 bayes_pls_golite062009
  • ligase activity
    		•  0.536538669306655 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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