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Protein Overview: CG31373-PA

General Information:
Name(s) found: CG31373-PA / FBpp0081794 [FlyBase]
Description(s) found:
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  • gi|24645728|ref|NP_731495.1| CG31373 [Drosophila melanogaster] [NCBI NR]
  • gi|23170932|gb|AAN13481.1| CG31373 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG31373 (CG31373, FBgn0051373). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:6534207..6535086. It has the cytological map location 86C4. Based on sequence similarity, it is predicted to have molecular function</span>: peptide deformylase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: translation. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG31373-PA translation from_gene[CG31373 CG31373 FBgn0051373] seq_release:3 mol_weight=22548 cds_boundaries:(3R:6,534,330..6,535,074[-]) aa_length:196 transcript_info:[CG31373-RA seq_release:3] gene_info:[gene symbol:CG31373 synonyms:[CG6482] FBgn0051 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8INL3) CG31373-PA [DrosMelano7227.FASTAC.txt]
  • CG31373-PA [Drosophila melanogaster]gi|24645728|ref|NP_731495.1| CG31373-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(6534309..6534620,6534778..6535056); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481; M [fly-100309-contam.fasta]
  • CG31373-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(6534309..6534620,6534778..6535056); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(6534309..6534620,6534778..6535056); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG31373 OS=Drosophila melanogaster GN=CG31373 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(6534309..6534620,6534778..6535056); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481,FlyMine:FBpp0081794,modMine:FBpp0081794; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(10709056..10709334,10708587..10708898)); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481,FlyMine:FBpp0081794,modMine:FBpp0081794; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(10709056..10709334,10708587..10708898)); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481,FlyMine:FBpp0081794,modMine:FBpp0081794; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Peptide deformylase OS=Drosophila melanogaster GN=CG31373 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0081794 type=protein; loc=3R:complement(join(10709056..10709334,10708587..10708898)); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481,FlyMine:FBpp0081794,modMine:FBpp0081794; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(10709056..10709334,10708587..10708898)); ID=FBpp0081794; name=CG31373-PA; parent=FBgn0051373,FBtr0082318; dbxref=FlyBase:FBpp0081794,FlyBase_Annotation_IDs:CG31373-PA,GB_protein:AAN13481.1,REFSEQ:NP_731495,GB_protein:AAN13481,UniProt/TrEMBL:Q8INL3,FlyMine:FBpp0081794,modMine:FBpp0081794; MD5=2b43c169d065d41853e8873efc4cb0c3; length=196; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEA]
    Molecular Function: iron ion binding [IEA]
    peptide deformylase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPPYRHFT QIGDPVLRQR AEEVPPEDID SREINQIIDG MVKVLRHYDC VGVAAPQVGI  60
   61 PLRIIVMEFR EGKQEQFKPE IYEERKMSIL PLAVFINPEL EIISSQVNKH PEGCMSVRGY 120
  121 SAEVERYDKV RIRGIGKLGT PSEMELEGWN ARIAQHEVDH LNGTIYMDRM DLSTFNCILW 180
  181 EQINAAEGRS AIWFHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 61.0 Peptide deformylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.58820956037645 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  2.29341894440799 bayes_pls_golite062009
  • peptide deformylase activity
    		•  2.09701270257336 bayes_pls_golite062009
  • hydrolase activity
    		•  1.74603757697733 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.59643176725105 bayes_pls_golite062009
  • formylmethionine deformylase activity
    		•  0.90550535791718 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle