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Protein Overview: CG16908-PA

General Information:
Name(s) found: CG16908-PA / FBpp0081644 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG16908 (CG16908, FBgn0037741). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5576838..5580303. It has the cytological map location 85E6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: binding. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1080 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHLEWYVTK IKPAVEGFIK EPSKDTLSVV ERAIEGFNFG EMRIYQVQTV VPLVVKLDEL  60
   61 TGENQELRTS LMNCLSNIVS KTYLADEKGL RSILVVVLQQ VRDSKTASMR PNLSEEIKLA 120
  121 AVQCIFEALR RSTTDVVESF YVKETAMVIG QILIMLLEII EQEKYRKLVQ TAIQCLMMVF 180
  181 YVHDESDQVD VVLRSQVANT IFIFLPKVLI VLFKTSMKDD KVGETIKSMA IQALGRIICI 240
  241 MFEETTNEFI KMRYDGDAFR KLFKNNEEAH QCDFTFFASK KATTEQNEER LHQMQTELRS 300
  301 HQWVAATSRH LRPIFAEMSI LRTHSAIRVR ESYSDMCCLL LKHCAYNLRG NFLHVLESVL 360
  361 ALSEDENEKI AQRCRDTLLL LQQQASSQDI FDENAEMLLD AHLNKWPRIL HRCEDNEQFA 420
  421 ELLFFKGFLR NVNTDKLQLL LLVPKNLEMF VTCLLTALDQ RPTRDLLNEE YSLRRIREGD 480
  481 SKGLAAELAK LPWRQFKYLS SRRTVDILYD IGALLGTEPT INRLVFDYCQ EMIQQRSPSM 540
  541 NECVLLLTLM VTPQEKKARG SRLVLAKLFL DQILRDEHWN LALQPDSAWR LKVNKPTHWF 600
  601 EDRTPGIYSS AIEVRTQDCD SDDEQTEVVG SRVTIADAQF NVLHTCLILD AVGHCARFIG 660
  661 DTFDRHIFLS LHKVLLKVAS SNTIVHQAAS FAFVSMQYAL KYAEPSHFIE CSTDYITFHL 720
  721 NALLKRSPDS TAAVDILTVV LQYSTRGNVP HLDSLFQTIR EECSKSHQTT NVHSYLRVFK 780
  781 SFLNHVSDWH DDAAAEVDTE LPMQVDEEQN VLSTWMSVLE RPKLLKDLNG DTNMGDAEEP 840
  841 AKDEADDADD TEEKPTKPVL PRHVEMVKDI LGQVIKFIST ADQGQQIAAL ECFSSGLPLL 900
  901 ADYEDELLPL VHLVWQPLIE KFRQKDALVL NRCFTLLHLL GVHAKDFILK RSLSDVIPQL 960
  961 KQFLKTASLH SSTETSQAQT QEYKLQLKLL KSLADFILGL QIEGRHLHEI MSTVVIYLSQ1020
 1021 IQPQELQTPA RAFFLQLISY NGPFVYVTLL QRAHLQDYQA NVNQIFEVMG FSIASGRDLG1080
 1081

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..518] FFAS03 1.12 No description for 2ie3A was found.
    2 View Details [519..973] PSI-BLAST 78.0 Crystal Structure of The Cand1-Cul1-Roc1 Complex
    3 View Details [974..1080] PSI-BLAST 4.045757 Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.267627928716605 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle