| Protein: | CG16908-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1080 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG16908-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
905.0 | [0..5] | [1058..8] |
|
Region A: Residues: [1-518] |
1 11 21 31 41 51
| | | | | |
1 MMHLEWYVTK IKPAVEGFIK EPSKDTLSVV ERAIEGFNFG EMRIYQVQTV VPLVVKLDEL 60
61 TGENQELRTS LMNCLSNIVS KTYLADEKGL RSILVVVLQQ VRDSKTASMR PNLSEEIKLA 120
121 AVQCIFEALR RSTTDVVESF YVKETAMVIG QILIMLLEII EQEKYRKLVQ TAIQCLMMVF 180
181 YVHDESDQVD VVLRSQVANT IFIFLPKVLI VLFKTSMKDD KVGETIKSMA IQALGRIICI 240
241 MFEETTNEFI KMRYDGDAFR KLFKNNEEAH QCDFTFFASK KATTEQNEER LHQMQTELRS 300
301 HQWVAATSRH LRPIFAEMSI LRTHSAIRVR ESYSDMCCLL LKHCAYNLRG NFLHVLESVL 360
361 ALSEDENEKI AQRCRDTLLL LQQQASSQDI FDENAEMLLD AHLNKWPRIL HRCEDNEQFA 420
421 ELLFFKGFLR NVNTDKLQLL LLVPKNLEMF VTCLLTALDQ RPTRDLLNEE YSLRRIREGD 480
481 SKGLAAELAK LPWRQFKYLS SRRTVDILYD IGALLGTE
|
| Detection Method: |  |
| Confidence: | 1.12 |
| Match: | 2ie3A |
| Description: | No description for 2ie3A was found. |
| Term | Confidence | Notes |
| binding | 0.267627928716605 | bayes_pls_golite062009 |
|
Region A: Residues: [519-973] |
1 11 21 31 41 51
| | | | | |
1 PTINRLVFDY CQEMIQQRSP SMNECVLLLT LMVTPQEKKA RGSRLVLAKL FLDQILRDEH 60
61 WNLALQPDSA WRLKVNKPTH WFEDRTPGIY SSAIEVRTQD CDSDDEQTEV VGSRVTIADA 120
121 QFNVLHTCLI LDAVGHCARF IGDTFDRHIF LSLHKVLLKV ASSNTIVHQA ASFAFVSMQY 180
181 ALKYAEPSHF IECSTDYITF HLNALLKRSP DSTAAVDILT VVLQYSTRGN VPHLDSLFQT 240
241 IREECSKSHQ TTNVHSYLRV FKSFLNHVSD WHDDAAAEVD TELPMQVDEE QNVLSTWMSV 300
301 LERPKLLKDL NGDTNMGDAE EPAKDEADDA DDTEEKPTKP VLPRHVEMVK DILGQVIKFI 360
361 STADQGQQIA ALECFSSGLP LLADYEDELL PLVHLVWQPL IEKFRQKDAL VLNRCFTLLH 420
421 LLGVHAKDFI LKRSLSDVIP QLKQFLKTAS LHSST
|
| Detection Method: | |
| Confidence: | 78.0 |
| Match: | 1u6gC |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [974-1080] |
1 11 21 31 41 51
| | | | | |
1 ETSQAQTQEY KLQLKLLKSL ADFILGLQIE GRHLHEIMST VVIYLSQIQP QELQTPARAF 60
61 FLQLISYNGP FVYVTLLQRA HLQDYQANVN QIFEVMGFSI ASGRDLG
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
