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Protein Overview: bocksbeutel-PA

General Information:
Name(s) found: bocksbeutel-PA / FBpp0099981 [FlyBase]
Description(s) found:
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  • gi|38422435|emb|CAE54811.1| bocksbeutel beta [Drosophila melanogaster] [NCBI NR]
  • gi|23170819|gb|AAF54412.2| bocksbeutel, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21355913|ref|NP_649917.1| bocksbeutel, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|17862706|gb|AAL39830.1| LD45742p [Drosophila melanogaster] [NCBI NR]
  • The gene bocksbeutel is referred to in FlyBase by the symbol Dmel\bocksbeutel (CG9424, FBgn0037719). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5415190..5416709. It has the cytological map location 85D27. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG9424-PA translation from_gene[CG9424 CG9424 FBgn0037719] seq_release:3 mol_weight=38761 cds_boundaries:(3R:5,415,515..5,416,667[-]) aa_length:351 transcript_info:[CG9424-RA seq_release:3] gene_info:[gene symbol:CG9424 FBgn0037719 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VHA7) CG9424 protein (LD45742p) [DrosMelano7227.FASTAC.txt]
  • CG9424-PA [Drosophila melanogaster]gi|38422435|emb|CAE54811.1| bocksbeutel beta [Drosophila melanogaster]gi|17862706|gb|AAL39830.1| LD45742p [Drosophila melanogaster]gi|21355913|ref|NP_649917.1| CG9424-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(5415496..5415504,5415605..5416651); ID=FBpp0099981; name=bocksbeutel-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412 [fly-100309-contam.fasta]
  • bocksbeutel beta [Drosophila melanogaster] [nr-271106-contam.fasta]
  • bocksbeutel CG9424-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD45742p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG9424-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(5415496..5415504,5415605..5416651); ID=FBpp0099981; name=bocksbeutel-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(5415496..5415504,5415605..5416651); ID=FBpp0099981; name=bocksbeutel-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Bocksbeutel beta OS=Drosophila melanogaster GN=bocksbeutel PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(5415496..5415504,5415605..5416651); ID=FBpp0099981; name=bocksbeutel-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412,FlyMine:FBpp0099981,modMine:FBpp0099981; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Bocksbeutel beta OS=Drosophila melanogaster GN=bocksbeutel PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(9589883..9590929,9589774..9589782)); ID=FBpp0099981; name=bocksbeutel-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412,FlyMine:FBpp0099981,modMine:FBpp0099981; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(9589883..9590929,9589774..9589782)); ID=FBpp0099981; name=bocks-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412,FlyMine:FBpp0099981,modMine:FBpp0099981; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q709R6, Bocksbeutel beta OS=Drosophila melanogaster GN=bocks PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0099981 type=protein; loc=3R:complement(join(9589883..9590929,9589774..9589782)); ID=FBpp0099981; name=bocks-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412,FlyMine:FBpp0099981,modMine:FBpp0099981; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(9589883..9590929,9589774..9589782)); ID=FBpp0099981; name=bocks-PA; parent=FBgn0037719,FBtr0082105; dbxref=FlyBase_Annotation_IDs:CG9424-PA,FlyBase:FBpp0099981,GB_protein:AAF54412.2,REFSEQ:NP_649917,GB_protein:AAF54412,UniProt/TrEMBL:Q9VHA7,FlyMine:FBpp0099981,modMine:FBpp0099981; MD5=ba6064c77d23bb1c21b35c02792cc6ed; length=351; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IEA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLSYLDTL GNKELLAKCL EHGLPGVPVT DSTRSVIIRR LKAKITGVPL NKSKSASKKA  60
   61 IPRRETVHGS QVTTPTSEPV RRTPGKSAGR TSSNNNKISE QSRRTIAYGL DNTSISGRSV 120
  121 QTTTTVSDMS SQSEDDDSYM VDSPVPNYSK DQQPRRYVSL AKSGVLTTSY TREVDQPLYE 180
  181 QEDIPRSYTY ERPHVPAATL HALPTYEPRI EPSTYRPTDL GFSRPLLTQT NLNSTSYEES 240
  241 STYNPKLSPI SPRNTFSGSA RPFGGPAPAP APIRQRQSVP VSGSNLARGR LLQPTTAVNT 300
  301 LYPQLNEFYD QPNDAGEPME TESESEVEEV PINSHFQKNR FSPLARKPLC Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] FFAS03 1.3 Thymopoietin, LAP2
    2 View Details [103..208] deduced N/A No confident structure predictions are available.
    3 View Details [209..351] MSA 4.125996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle