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Protein Overview: CG8149-PA

General Information:
Name(s) found: CG8149-PA / FBpp0081539 [FlyBase]
Description(s) found:
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  • gi|7299189|gb|AAF54386.1| CG8149 [Drosophila melanogaster] [NCBI NR]
  • gi|21355863|ref|NP_649898.1| CG8149 [Drosophila melanogaster] [NCBI NR]
  • gi|16769442|gb|AAL28940.1| LD31448p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8149 (CG8149, FBgn0037700). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5330382..5331588. It has the cytological map location 85D18. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: nucleic acid binding. There is experimental evidence that it is involved in the biological process</span>: wing disc dorsal/ventral pattern formation; autophagic cell death; salivary gland cell autophagic cell death. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG8149-PA translation from_gene[CG8149 CG8149 FBgn0037700] seq_release:3 mol_weight=32905 cds_boundaries:(3R:5,330,463..5,331,440[+]) aa_length:308 transcript_info:[CG8149-RA seq_release:3] gene_info:[gene symbol:CG8149 FBgn0037700 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VHC8) CG8149 protein (LD31448P) [DrosMelano7227.FASTAC.txt]
  • (AE003683) CG8149 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG8149-PA [Drosophila melanogaster]gi|16769442|gb|AAL28940.1| LD31448p [Drosophila melanogaster]gi|21355863|ref|NP_649898.1| CG8149-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(5330447..5330476,5330531..5331427); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386; MD5=9b634 [fly-100309-contam.fasta]
  • LD31448p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG8149-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(5330447..5330476,5330531..5331427); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(5330447..5330476,5330531..5331427); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG8149 OS=Drosophila melanogaster GN=CG8149 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(5330447..5330476,5330531..5331427); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386,FlyMine:FBpp0081539,modMine:FBpp0081539; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG8149 OS=Drosophila melanogaster GN=CG8149 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:join(9504725..9504754,9504809..9505705); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386,FlyMine:FBpp0081539,modMine:FBpp0081539; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(9504725..9504754,9504809..9505705); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386,FlyMine:FBpp0081539,modMine:FBpp0081539; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0081539 type=protein; loc=3R:join(9504725..9504754,9504809..9505705); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386,FlyMine:FBpp0081539,modMine:FBpp0081539; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(9504725..9504754,9504809..9505705); ID=FBpp0081539; name=CG8149-PA; parent=FBgn0037700,FBtr0082061; dbxref=FlyBase:FBpp0081539,FlyBase_Annotation_IDs:CG8149-PA,GB_protein:AAF54386.1,REFSEQ:NP_649898,GB_protein:AAF54386,UniProt/TrEMBL:Q9VHC8,FlyMine:FBpp0081539,modMine:FBpp0081539; MD5=9b6346e9edb9f0ebd7fc9c5bcb17ff03; length=308; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: autophagic cell death [IEP]
    wing disc dorsal/ventral pattern formation [IGI]
    salivary gland cell autophagic cell death [IEP]
    Molecular Function: nucleic acid binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESDVTKMK VADLKRELKL RGLAVNGNKT ELQDRLQTAL LEGDLSLEDS AIADAIDDDD  60
   61 VSFTDEDEHK LLGDENDDEL LKSPVSTPTT VAIPDLLAEE KTSSAPDAAA PTKKIVLKRN 120
  121 NSQQSTGTVA STGTTPSKEN EAPAAAASDS TGETPTKKHK PIVVGPKTEG EKPSGDKKLN 180
  181 QLTAQERLEL RAKKFGITPP AVANTATAVA VAINKSSSAS ITANKGNKET EEQQKEALKK 240
  241 RAERFGFVVP DKAPTSKADD RLQKRKERFG AGAVSAATTT PTTTESKDAW SEKARARLER 300
  301 FKTAPSTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] MSA 1.17099 View MSA. No confident structure predictions are available.
    2 View Details [159..308] MSA 2.171992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle