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Protein Overview: CG9836-PA

General Information:
Name(s) found: CG9836-PA / FBpp0081412 [FlyBase]
Description(s) found:
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  • gi|7299098|gb|AAF54298.1| CG9836 [Drosophila melanogaster] [NCBI NR]
  • gi|21355597|ref|NP_649840.1| CG9836 [Drosophila melanogaster] [NCBI NR]
  • gi|16648004|gb|AAL25267.1| GH01635p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9836 (CG9836, FBgn0037637). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:4648564..4649895. It has the cytological map location 85B2. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; iron-sulfur cluster binding; iron ion binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: iron-sulfur cluster assembly. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG9836-PA translation from_gene[CG9836 CG9836 FBgn0037637] seq_release:3 mol_weight=16718 cds_boundaries:(3R:4,649,164..4,649,808[-]) aa_length:154 transcript_info:[CG9836-RA seq_release:3] gene_info:[gene symbol:CG9836 FBgn0037637 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VHK6) CG9836 protein (GH01635P) [DrosMelano7227.FASTAC.txt]
  • (AE003680) CG9836 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9836-PA [Drosophila melanogaster]gi|16648004|gb|AAL25267.1| GH01635p [Drosophila melanogaster]gi|21355597|ref|NP_649840.1| CG9836-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(4649146..4649523,4649707..4649793); ID=FBpp0081412; name=CG9836-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298; MD5 [fly-100309-contam.fasta]
  • CG9836-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH01635p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(4649146..4649523,4649707..4649793); ID=FBpp0081412; name=CG9836-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(4649146..4649523,4649707..4649793); ID=FBpp0081412; name=CG9836-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG9836 OS=Drosophila melanogaster GN=CG9836 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(4649146..4649523,4649707..4649793); ID=FBpp0081412; name=CG9836-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298,FlyMine:FBpp0081412,modMine:FBpp0081412; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG9836 OS=Drosophila melanogaster GN=CG9836 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(8823985..8824071,8823424..8823801)); ID=FBpp0081412; name=CG9836-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298,FlyMine:FBpp0081412,modMine:FBpp0081412; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(8823985..8824071,8823424..8823801)); ID=FBpp0081412; name=IscU-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298,FlyMine:FBpp0081412,modMine:FBpp0081412; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG9836 OS=Drosophila melanogaster GN=IscU PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0081412 type=protein; loc=3R:complement(join(8823985..8824071,8823424..8823801)); ID=FBpp0081412; name=IscU-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298,FlyMine:FBpp0081412,modMine:FBpp0081412; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(8823985..8824071,8823424..8823801)); ID=FBpp0081412; name=IscU-PA; parent=FBgn0037637,FBtr0081930; dbxref=FlyBase:FBpp0081412,FlyBase_Annotation_IDs:CG9836-PA,GB_protein:AAF54298.1,REFSEQ:NP_649840,GB_protein:AAF54298,UniProt/TrEMBL:Q9VHK6,FlyMine:FBpp0081412,modMine:FBpp0081412; MD5=34602d5bb15d0908b00e8cf25ce00bbb; length=154; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 154 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: iron-sulfur cluster assembly [IEA]
    Molecular Function: protein binding [IEA]
    iron ion binding [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVRNSSRL LRSQLKRVQS VPVALYHENV VEHYENPRNV GSLDKKDVTV GTGLVGAPAC  60
   61 GDVMKLQIKV DENGKIVDAK FKTFGCGSAI ASSSLATEWV KGKSIDEAGK LKNTDIAKEL 120
  121 RLPPVKLHCS MLAEDAIKAA LADYKVKQQK KVAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 51.69897 Solution NMR Structure of The Haemophilus Influenzae Iron-Sulfur Cluster Assembly Protein U (IscU) with Zinc Bound at the Active Site. Northeast Structural Genomics Consortium Target IR24. This protein is not apo, it is a model without zinc binding constr

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.626732820625785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle