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Protein Overview: mRpL1-PA

General Information:
Name(s) found: mRpL1-PA / FBpp0081322 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene mitochondrial ribosomal protein L1 is referred to in FlyBase by the symbol Dmel\mRpL1 (CG7494, FBgn0037566). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:4127164..4128492. It has the cytological map location 84F9-84F10. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: RNA processing [IEA]
    translation [ISS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSILSSMRA LALRQSTVEP LRLLHLSAVS EAARKGTREK ARKKKVKVEV KKVGFIPHNQ  60
   61 RNKKINVKRA DKHVDDSWKQ VPKDDCYVGR YYRWPVYSVQ EAIQCHRETH HPSMYNVPNA 120
  121 PLNLDIELNM QAEKITRFVD NFQRMAMIPH KFDHGEERKI IVFTKGNNEV LEAREAGASL 180
  181 VGGVELIKDI TSGELLLSDY QYVIAHPNIL AELVALRGLM KRKFPNPKSE TLGTNLAEMI 240
  241 VKFSSGISYS AAKDEYQQNF GLITASVGTL DMDVQKLEEN IKFLLQDINT MRPKREGRFI 300
  301 TRVLLKSPPS SEQLKIDPFV YVPEMWDKST AKVKRDGAKK QTEPAEPQEA VASN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..354] PSI-BLAST 61.221849 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.98821526471491 bayes_pls_golite062009
  • structural molecule activity
    		•  9.4110731269774 bayes_pls_golite062009
  • binding
    		•  1.37133122073906 bayes_pls_golite062009
  • protein binding
    		•  0.335149649581279 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle