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Protein Overview: FBpp0303760, FBp...

General Information:
Name(s) found: FBpp0304466 [FlyBase]
FBpp0303760 [FlyBase]
CD98hc-PA / FBpp0081314 [FlyBase]
Description(s) found:
Found 33 descriptions.
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  • type=protein; loc=3R:complement(3800341..3800587,3800859..3802135,3802612..3802785); ID=FBpp0304466; name=CD98hc-PF; parent=FBgn0037533,FBtr0332157; dbxref=FlyBase:FBpp0304466,FlyBase_Annotation_IDs:CG2791-PF,REFSEQ:NP_001262354,GB_protein:AGB95736; MD5=c93c18f3bedeaf3a193797261839b838; length=565; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(3800341..3800587,3800859..3802135,3802612..3802785); ID=FBpp0303760; name=CD98hc-PB; parent=FBgn0037533,FBtr0331342; dbxref=FlyBase:FBpp0303760,FlyBase_Annotation_IDs:CG2791-PB,REFSEQ:NP_001262355,GB_protein:AGB95737; MD5=c93c18f3bedeaf3a193797261839b838; length=565; release=r5.56; species=Dmel; [FlyBase]
  • The gene CD98 heavy chain is referred to in FlyBase by the symbol Dmel\CD98hc (CG2791, FBgn0037533). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:3800128..3803488. It has the cytological map location 84E6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: catalytic activity; cation binding. There is experimental evidence that it is involved in the biological process</span>: leucine import. 8 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEA]
    leucine import [IMP]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQDEKAAHA DGADEQMLGS NGVEDKLAER RDEVKFIKGD HQNGDAKIDI GTVNGGKPAF  60
   61 TGMSKEELMK YANDPFWVRL RWIFFVCFWA IWVGMLVGAI LIIIGAPKCA APQPLPWYKR 120
  121 GPHAKFASVE TCRPEDVQVA KKLVSAGAIY ELPAALTYDV KKPEVEEKIK HLVALYQGSD 180
  181 TRVILDLTPN YAAKNSQLVQ DAIANPEKRS AFVWVSGGKA LPNNWLKVGG NRSAWEKVGD 240
  241 NYVLSQFEDG YYDLKMNSTI IRNEFGAVLK HLVALGVRGF RLKNTKFFAL FDSLEDEQIS 300
  301 SSPKDFSLGP NEYGFYSHRQ TTFLSGLGDV LYDYLSIVKN ASDEAFFSVA EDVMEPQVYQ 360
  361 LSGDSGAYGI DLPMYGNFVK VLSKSKPDTS LQKELDNTLA QSGTDSWLQW NLADVYVDTP 420
  421 QDPSALAMFL SLLPGVPVVA VDAVAYQNVT EETYRQITSL RKTASYMHGN LNLYQADPLV 480
  481 AFSRIKSGNP GYFVIFNPTE LPQASNFTIP DNLPDKMTVS YFSEQYNNNM DNSGKVAHAG 540
  541 RVNLKDLKVA PHSSIILTYV PVKAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] deduced N/A No confident structure predictions are available.
    2 View Details [76..565] PSI-BLAST 93.30103 CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle