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Protein Overview: FBpp0308960, FBp...

General Information:
Name(s) found: FBpp0311968 [FlyBase]
FBpp0308960 [FlyBase]
CG1307-PC / FBpp0290838 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=3R:complement(2482244..2482615,2482870..2483058); ID=FBpp0311968; name=CG1307-PE; parent=FBgn0026566,FBtr0346140; dbxref=FlyBase:FBpp0311968,FlyBase_Annotation_IDs:CG1307-PE; MD5=fad5152ab39195e8848758069dda4b3a; length=186; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(2482244..2482615,2482870..2483058); ID=FBpp0308960; name=CG1307-PD; parent=FBgn0026566,FBtr0339933; dbxref=FlyBase:FBpp0308960,FlyBase_Annotation_IDs:CG1307-PD; MD5=fad5152ab39195e8848758069dda4b3a; length=186; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1307 (CG1307, FBgn0026566). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2482012..2483504. It has the cytological map location 84A1. Based on sequence similarity, it is predicted to have molecular function</span>: aminoacyl-tRNA hydrolase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: tRNA metabolic process. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 186 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [ISS]
    Biological Process: tRNA metabolic process [ISS]
    translation [IEA]
    Molecular Function: aminoacyl-tRNA hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDKLLDPTQ IINGLAVMLS FFVGYRYALK RGDAKDSVTE GAATPFSQES SVSSGSEASV  60
   61 SDKGYGGLND NFKMVLVVRN DLKMGKGKIA AQCGHGAVGA YQRAVVRTPR LLRSWENCGC 120
  121 AKIAVRVESE AELMAIKKEA ERQQLNTCLI RDAGRTQIEA NSKTVLAVGP AAAADIDRVT 180
  181 GHLKLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] PSI-BLAST 49.0 Crystal structure of bit1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle