YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0308960, FBp...
Organism:	Drosophila melanogaster
Length:	186 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308960, FBp....

Description	E-value	Query Range	Subject Range
gi\|33239415, gi\|... - gi\|33239415\|ref\|NP_778169.1\| Bcl-2 inhibitor of transcription isoform a [Mus musculus], gi\|26324504\|...	241.0	[0..5]	[185..12]
gi\|62078455, gi\|... - gi\|62078455\|ref\|NP_001013882.1\| Bcl-2 inhibitor of transcription [Rattus norvegicus], gi\|54035568\|gb...	238.0	[0..5]	[185..11]
PTH2_BOVIN - Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1	233.0	[0..5]	[185..11]
gi\|21483470 - gi\|21483470\|gb\|AAM52710.1\| LD46144p [Drosophila melanogaster]	230.0	[0..1]	[186..26]
gi\|109114555, gi... - gi\|109114555\|ref\|XP_001109316.1\| PREDICTED: similar to Bcl-2 inhibitor of transcription isoform a is...	228.0	[0..5]	[185..11]
ENSPTRT00000017368 - null PTRH2 - peptidyl-tRNA hydrolase 2 gi\|190690369, gi... - gi\|190691749\|gb\|ACE87649.1\| peptidyl-tRNA hydrolase 2 protein [synthetic construct], gi\|190690369\|gb...	228.0	[0..5]	[185..11]

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Predicted Domain #1

Region A:
Residues: [1-186]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDKLLDPTQ IINGLAVMLS FFVGYRYALK RGDAKDSVTE GAATPFSQES SVSSGSEASV  60
   61 SDKGYGGLND NFKMVLVVRN DLKMGKGKIA AQCGHGAVGA YQRAVVRTPR LLRSWENCGC 120
  121 AKIAVRVESE AELMAIKKEA ERQQLNTCLI RDAGRTQIEA NSKTVLAVGP AAAADIDRVT 180
  181 GHLKLL

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Detection Method:	PSI-BLAST
Confidence:	49.0
Match:	1q7sA
Description:	Crystal structure of bit1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.534516847146079	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: