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Protein Overview: Obp83ef-PA

General Information:
Name(s) found: Obp83ef-PA / FBpp0078267 [FlyBase]
Description(s) found:
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  • gi|66772809|gb|AAY55716.1| IP02370p [Drosophila melanogaster] [NCBI NR]
  • gi|24644507|ref|NP_731042.1| Odorant-binding protein 83ef [Drosophila melanogaster] [NCBI NR]
  • gi|23170327|gb|AAF51918.2| Odorant-binding protein 83ef [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 83ef is referred to in FlyBase by the symbol Dmel\Obp83ef (CG31557, FBgn0046876). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1935402..1936740. It has the cytological map location 83D4. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG31557-PA translation from_gene[CG31557 Obp83f FBgn0046876] seq_release:3 mol_weight=28016 cds_boundaries:(3R:1,935,502..1,936,728[-]) aa_length:245 transcript_info:[CG31557-RA seq_release:3] gene_info:[gene symbol:Obp83f synonyms:[CG15583] FBgn00468 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VNL2) CG31557 protein [DrosMelano7227.FASTAC.txt]
  • CG31557-PA [Drosophila melanogaster]gi|24644507|ref|NP_731042.1| CG31557-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(1935501..1936187,1936680..1936730); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918; M [fly-100309-contam.fasta]
  • IP02370p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 83ef CG31557-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG31557-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(1935501..1936187,1936680..1936730); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(1935501..1936187,1936680..1936730); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • IP02370p OS=Drosophila melanogaster GN=Obp83ef PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(1935501..1936187,1936680..1936730); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918,FlyMine:FBpp0078267,modMine:FBpp0078267; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(6110958..6111008,6109779..6110465)); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918,FlyMine:FBpp0078267,modMine:FBpp0078267; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(6110958..6111008,6109779..6110465)); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918,FlyMine:FBpp0078267,modMine:FBpp0078267; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0078267 type=protein; loc=3R:complement(join(6110958..6111008,6109779..6110465)); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918,FlyMine:FBpp0078267,modMine:FBpp0078267; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(6110958..6111008,6109779..6110465)); ID=FBpp0078267; name=Obp83ef-PA; parent=FBgn0046876,FBtr0078618; dbxref=FlyBase:FBpp0078267,FlyBase_Annotation_IDs:CG31557-PA,GB_protein:AAF51918.2,REFSEQ:NP_731042,GB_protein:AAF51918,UniProt/TrEMBL:Q9VNL2,FlyMine:FBpp0078267,modMine:FBpp0078267; MD5=59c9079c7a8868e1326eb6a4f8c05b04; length=245; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPRAVLVS LFLICSQALA DLSGDAQTLE KCLRQLSSPE SIAGDLRKLE RYSSWTREEV  60
   61 PCLMRCLARE KGWFDVEENK WRLKQLTEDL GADVYNYCRF ELRRMGSDGC SFAYRGLRCL 120
  121 KQAEMHAGTS LSTLLQCSRQ LNATNVELLQ YSKLKSKEPI PCLFQCFADA MGFYDPDGNW 180
  181 RLENWKQAFG PSGNEDQSSG ADYSGCRLSG TQREVALSKC SWMYHEYKCW ERVNGNKLVE 240
  241 DNEEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] FFAS03 3.47 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
    2 View Details [126..245] FFAS03 3.26 Complex of Drosophila odorant binding protein LUSH with butanol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • odorant binding
    		•  4.34740138836018 bayes_pls_golite062009
  • pheromone binding
    		•  2.50061185527994 bayes_pls_golite062009
  • binding
    		•  1.71868583149917 bayes_pls_golite062009
  • phenylalkylamine binding
    		•  1.10044668642283 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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