YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Obp83ef-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPRAVLVS LFLICSQALA DLSGDAQTLE KCLRQLSSPE SIAGDLRKLE RYSSWTREEV  60
   61 PCLMRCLARE KGWFDVEENK WRLKQLTEDL GADVYNYCRF ELRRMGSDGC SFAYRGLRCL 120
  121 KQAEMHAGTS LSTLLQCSRQ LNATNVELLQ YSKLKSKEPI PCLFQCFADA MGFYDPDGNW 180
  181 RLENWKQAFG PSGNEDQSSG ADYSGCRLSG TQREVALSKC SWMYHEYKCW ERVNGNKLVE 240
  241 DNEEQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	245	0.99