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Protein Overview: Obp83cd-PA

General Information:
Name(s) found: Obp83cd-PA / FBpp0078233 [FlyBase]
Description(s) found:
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  • gi|23170326|gb|AAF51919.2| Odorant-binding protein 83cd [Drosophila melanogaster] [NCBI NR]
  • gi|21357379|ref|NP_649612.1| Odorant-binding protein 83cd [Drosophila melanogaster] [NCBI NR]
  • gi|17946448|gb|AAL49257.1| RE67916p [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 83cd is referred to in FlyBase by the symbol Dmel\Obp83cd (CG15582, FBgn0046878). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1933856..1935457. It has the cytological map location 83D4. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG15582-PA translation from_gene[CG15582 Obp83c FBgn0046878] seq_release:3 mol_weight=28002 cds_boundaries:(3R:1,933,907..1,935,333[+]) aa_length:242 transcript_info:[CG15582-RA seq_release:3] gene_info:[gene symbol:Obp83c FBgn0046878 gene_boundaries: [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VNL1) CG15582 protein (RE67916p) [DrosMelano7227.FASTAC.txt]
  • CG15582-PA [Drosophila melanogaster]gi|17946448|gb|AAL49257.1| RE67916p [Drosophila melanogaster]gi|21357379|ref|NP_649612.1| CG15582-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(1933909..1933959,1934023..1934352,1934991..1935338); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein: [fly-100309-contam.fasta]
  • Odorant-binding protein 83cd CG15582-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG15582-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE67916p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(1933909..1933959,1934023..1934352,1934991..1935338); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(1933909..1933959,1934023..1934352,1934991..1935338); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 83cd OS=Drosophila melanogaster GN=Obp83cd PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(1933909..1933959,1934023..1934352,1934991..1935338); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919,FlyMine:FBpp0078233,modMine:FBpp0078233; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(6108187..6108237,6108301..6108630,6109269..6109616); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919,FlyMine:FBpp0078233,modMine:FBpp0078233; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(6108187..6108237,6108301..6108630,6109269..6109616); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919,FlyMine:FBpp0078233,modMine:FBpp0078233; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0078233 type=protein; loc=3R:join(6108187..6108237,6108301..6108630,6109269..6109616); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919,FlyMine:FBpp0078233,modMine:FBpp0078233; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(6108187..6108237,6108301..6108630,6109269..6109616); ID=FBpp0078233; name=Obp83cd-PA; parent=FBgn0046878,FBtr0078584; dbxref=FlyBase:FBpp0078233,FlyBase_Annotation_IDs:CG15582-PA,GB_protein:AAF51919.2,REFSEQ:NP_649612,GB_protein:AAF51919,UniProt/TrEMBL:Q9VNL1,FlyMine:FBpp0078233,modMine:FBpp0078233; MD5=1bf69e01a6ec17f8e87f76d68f8ad83a; length=242; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMKSGILIA LCLCLSLNEG LALLEHEGET INRCIQNYGG LTAENAERLE RFKEWSDSYE  60
   61 EIPCFTRCYL SEMFDFYNNL TGFNKDGIVG VFGRPVYEAC RKKLELPFES GESSCKHAYE 120
  121 GFHCITNMES HPFTVIDNMP NISPSAKDAM KDCLQDVHQD EWKSFDAFAY YPVNEPIPCF 180
  181 TRCFVDKLHI FEEKTRLWKL EAMKQNLGIP AKGARIRTCH RHRGRDRCAT YYKQFTCYAM 240
  241 AV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] FFAS03 1.3 No description for 2pqlA was found.
    2 View Details [190..242] FFAS03 1.36 Soft-SAD crystal structure of a pheromone binding protein from the honeybee Apis mellifera L.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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