YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Obp83cd-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMKSGILIA LCLCLSLNEG LALLEHEGET INRCIQNYGG LTAENAERLE RFKEWSDSYE  60
   61 EIPCFTRCYL SEMFDFYNNL TGFNKDGIVG VFGRPVYEAC RKKLELPFES GESSCKHAYE 120
  121 GFHCITNMES HPFTVIDNMP NISPSAKDAM KDCLQDVHQD EWKSFDAFAY YPVNEPIPCF 180
  181 TRCFVDKLHI FEEKTRLWKL EAMKQNLGIP AKGARIRTCH RHRGRDRCAT YYKQFTCYAM 240
  241 AV

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	242	0.99