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Protein Overview: Hpr1-PA

General Information:
Name(s) found: Hpr1-PA / FBpp0078316 [FlyBase]
Description(s) found:
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  • gi|7296666|gb|AAF51946.1| Hpr1 [Drosophila melanogaster] [NCBI NR]
  • gi|46800533|emb|CAD89220.1| Hpr1 protein [Drosophila melanogaster] [NCBI NR]
  • gi|24644436|ref|NP_649594.1| Hpr1 [Drosophila melanogaster] [NCBI NR]
  • gi|21483450|gb|AAM52700.1| LD43883p [Drosophila melanogaster] [NCBI NR]
  • The gene Hpr1 is referred to in FlyBase by the symbol Dmel\Hpr1 (CG2031, FBgn0037382). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1644516..1647149. It has the cytological map location 83C4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. It is reported to be involved in the biological process</span>: mRNA export from nucleus. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG2031-PA translation from_gene[CG2031 CG2031 FBgn0037382] seq_release:3 mol_weight=80761 cds_boundaries:(3R:1,644,613..1,647,051[-]) aa_length:701 transcript_info:[CG2031-RA seq_release:3] gene_info:[gene symbol:CG2031 FBgn0037382 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VNI8) CG2031 protein (LD43883p) [DrosMelano7227.FASTAC.txt]
  • (AE003601) CG2031 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • Hpr1 protein [Drosophila melanogaster]gi|7296666|gb|AAF51946.1| CG2031-PA [Drosophila melanogaster]gi|21483450|gb|AAM52700.1| LD43883p [Drosophila melanogaster]gi|24644436|ref|NP_649594.1| CG2031-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(1644613..1645366,1645421..1645723,1645782..1646068,1646226..1646909,1646977..1647054); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF [fly-100309-contam.fasta]
  • Hpr1 protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD43883p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG2031-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Hpr1 CG2031-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(1644613..1645366,1645421..1645723,1645782..1646068,1646226..1646909,1646977..1647054); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(1644613..1645366,1645421..1645723,1645782..1646068,1646226..1646909,1646977..1647054); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Hpr1 OS=Drosophila melanogaster GN=Hpr1 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(1644613..1645366,1645421..1645723,1645782..1646068,1646226..1646909,1646977..1647054); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946,FlyMine:FBpp0078316,modMine:FBpp0078316; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Hpr1 OS=Drosophila melanogaster GN=Hpr1 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(5821255..5821332,5820504..5821187,5820060..5820346,5819699..5820001,5818891..5819644)); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946,FlyMine:FBpp0078316,modMine:FBpp0078316; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(5821255..5821332,5820504..5821187,5820060..5820346,5819699..5820001,5818891..5819644)); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946,FlyMine:FBpp0078316,modMine:FBpp0078316; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0078316 type=protein; loc=3R:complement(join(5821255..5821332,5820504..5821187,5820060..5820346,5819699..5820001,5818891..5819644)); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946,FlyMine:FBpp0078316,modMine:FBpp0078316; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(5821255..5821332,5820504..5821187,5820060..5820346,5819699..5820001,5818891..5819644)); ID=FBpp0078316; name=Hpr1-PA; parent=FBgn0037382,FBtr0078667; dbxref=FlyBase:FBpp0078316,FlyBase_Annotation_IDs:CG2031-PA,GB_protein:AAF51946.1,REFSEQ:NP_649594,GB_protein:AAF51946,UniProt/TrEMBL:Q9VNI8,FlyMine:FBpp0078316,modMine:FBpp0078316; MD5=05ce02923efd5e6cb4a3929e7c1bd5ae; length=701; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: nucleoplasm [ISS]
    Biological Process: mRNA export from nucleus [NAS]
    signal transduction [IEA]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAVEVANT APEKLANYFA LQSAFEKALE LAITDGKVEL LVKEYNRFPA NTEHDKRLPM  60
   61 DHAFRVLLMK RLDEDVSRIG ELVRLSVEAT RAEIVSNTIP VVLLIDTFDV VTLDKCQKIF 120
  121 QFVEDMVEVW KEEIFFSSCK NNILRMCNDL LRRLSRTQNT VFCGRIQLFL SKFFPFSERS 180
  181 GLNIVSEFNL DNFTEYGLDS KDHDESDNKE LEDTAEDIPL KIDYDLYCKF WSLQDFFRNP 240
  241 NQCYNKPQWK MFQMHADNIL QSFSSFKLED VRQSSNENAS GTDQAMDVDE EAVDTTAVSS 300
  301 VIKANHFFAK FLTNPKLLAL QLSDANFRRA VLVQFLILFQ YLQVSVKFKS DTQTLTADQA 360
  361 DFIKETESRV YKLLEETPPY GKRFSRTVYH MLAREEMWNN WKNEGCKEFK KPEEPTLSEE 420
  421 DSKPTPNKRP RRPLGDALRD ASRSGKFYLG NDNLTRLWNY SPDNLQACKS EQRNFLPLLE 480
  481 TYLETPHEKV DPAFEWRALR LLARQTPHFF TSLSQPSSKI SDYLEQVRKR LIRDKEPKPA 540
  541 ALLSNNSSEN NFGLSVNNVH TEGEQDATVA LQDGEPEQDL EVEDNEPVVE EVDEVPAHEK 600
  601 PLMVTKEHIE EVAPLIGEPW MKVGKKIGFT NDELLFFQME HPTANVACVK MLTNWISDDD 660
  661 DATLENWAYM LEGLEMNKAA EAVKAIIERE KSGSTAAFCL R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] MSA 2.035958 View MSA. No confident structure predictions are available.
    2 View Details [186..294] deduced N/A No confident structure predictions are available.
    3 View Details [295..434] MSA 1.034974 View MSA. No confident structure predictions are available.
    4 View Details [435..593] MSA 1.106993 View MSA. No confident structure predictions are available.
    5 View Details [594..701] PSI-BLAST 23.522879 Solution structure of the death domain of nuclear matrix protein p84


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle